Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00429 ATGATACCACTGAGTCTGATCTCTGAGTGTACCAAGAATTTGGCTAGTGAACATGCACAAGTGGTGCCTATTTCACTTTTTGTGGCTGTTCTCTGCCTTACTTTGATCATTGGTCACTTGTTTGAAAGAAATCGATGGATTAATGAATCCATAGTTGCCATCATAATAGGAATCATTGCTGGAATTATACTGTTATTGATCAGCAAAGGAAAGAGTTCTCGCATCCTTACATTTAATGAAGAACTATTCTTCATATATCTCCTTCCTCCCATAATATTCAATGCAGGATTTCAGGTGAAGAAGAAACAATTCTTCCATAACTTTTTAACCATCATGATGTTTGGTGTCATCGGTGTTTTCATTTCAACTTTTGTTATTACTTGCGGCAGCTGGTGGATATTCCCCAAGTTGAACTTGCTTTGCCTGACAGCGAAAGATTATCTTGGTGAGGCCACTATAGGAACAATTTTCTCAGCAACAGACACAGTTTGTACCCTGCAGGTTCTGCATCAAGATGAGACTCCTTTACTTTACAGCCTAGTCTTTGGGGAAGGAGTGGTAAATGATGCCACATCAGTTGTTCTCTTCAATGCAGTGCAAAAGCTTGATGTTTCAAAATTTAGCAGCAAGACATTCCGGTTAATTGGAGATTTCTTCTATCTATTCGGATTAAGCACTGGTCTAGGAGTTCTAGCTGGCCTCCTCACATCATATATCTTGAAAGCCTTATGCTTTGGAAGACATTCAAGTGTTCGTGAAATTGCATTGATGATATTAAAGGCATACCTATCCTATATGTTGGCAGAGCTATGTGATCTAAGTGGAATCATCACCGTTTTCTTTTGTGGAATACTCATGTCACATTATGCATGGTATAATATGGCTGAAACTTCAAGAATCACAACCAGGCATGTGTTTGCAACAATGTCATTTATTGCAGAAACCTTCATATTCCTATATGTGGGCATGGATGCCCTTGACATTGAGAAGTGGAAGATGACTAAATTAAGTTACGGAAGTTTGATGGGGATATACAGTTCCTTAATCCTATTGATATTGGTTGGCCGTGCTGCTTTTGTTTTCCCTCTCTCTGCTATTGCCAATTATACAAACACACGTGCCAGTTCTGACCAAGCATCACGCATCACTTTCAGACAGCAGATAATCGTTTGGTGGGCAGGGCTAATGAGGGGAGCTGTCTCCATTGCTCTGGCTTTCAAACAGTTCACATTTTCTGGAGTTACTTCTGATCCAGTTAATGCAACAATGATTACCAACACCATTATTGTTGTCCTTTTCAGCACACTGGTGTTTGGTTTTCTCACAAAACCATTAATAAGATATCTGCTACCCCACGCTGCTACAAGGAAAAACATCATCCATGAAGAACCAGGTTCACAACTTGAGGACTTGAATCTACCTTTGCTATCCCTAGAGGAGTCCGCAGCCACCAACATTAGCCGCGCAAAGGAAAGTTTGTCCATGTTAATAGAAAGTCCTGTGTTCACCATACATCACTTTTGGAGGAGGTTTGATGATGCCTACATGAGACCTATTTTTGGGGGACCTCATAATAACGGGTCACAGTGCTAG 1593 0.4049 MIPLSLISECTKNLASEHAQVVPISLFVAVLCLTLIIGHLFERNRWINESIVAIIIGIIAGIILLLISKGKSSRILTFNEELFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMMFGVIGVFISTFVITCGSWWIFPKLNLLCLTAKDYLGEATIGTIFSATDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKLDVSKFSSKTFRLIGDFFYLFGLSTGLGVLAGLLTSYILKALCFGRHSSVREIALMILKAYLSYMLAELCDLSGIITVFFCGILMSHYAWYNMAETSRITTRHVFATMSFIAETFIFLYVGMDALDIEKWKMTKLSYGSLMGIYSSLILLILVGRAAFVFPLSAIANYTNTRASSDQASRITFRQQIIVWWAGLMRGAVSIALAFKQFTFSGVTSDPVNATMITNTIIVVLFSTLVFGFLTKPLIRYLLPHAATRKNIIHEEPGSQLEDLNLPLLSLEESAATNISRAKESLSMLIESPVFTIHHFWRRFDDAYMRPIFGGPHNNGSQC 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00429 530 Gene3D - 151 198 - -
Vian6g00429 530 PRINTS Na+/H+ exchanger signature 154 164 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vian6g00429 530 PRINTS Na+/H+ exchanger signature 96 110 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vian6g00429 530 PRINTS Na+/H+ exchanger signature 82 93 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vian6g00429 530 PRINTS Na+/H+ exchanger signature 111 119 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vian6g00429 530 PANTHER SODIUM/HYDROGEN EXCHANGER 17 525 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Vian6g00429 530 Pfam Sodium/hydrogen exchanger family 29 446 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00429 Vian-Chr6 18132433 18136908 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00429 11 530 Antiporters AT5G55470 67.238 0.0 729
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00429 6 18132433 18136908 Vian6g00429 6 18132433 18136908 ECH