Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00403 ATGTCTTTCCTTTCGGGCTATGATCTCTCCGGCCTATTCGAGACCAATCAGAAAACGGTCGCAGTGTTCACTTCCAAGTGTTCTGCGTCGATTATGGTCAACATCGCCATGGCGGCCAAAGGACTGAGTTTCATGGTGACGGAGGTGAAGGACTTCAAAATCCGACTCCAAGAGACGGTCGTAGAAAAGAAGAGACAACTCGCGATCACAACGGAGGTCTTTGAGGTGGCAGTGACGGTCGGTGGCATCGGTGAGGAGGCGGTTGTTGATGAGTTTGAGAGCGTAGAATTGGTTGGAGGAGGGGTGGAAGCAGCGGAAGACGGTGGCGAATTTGCCTCGATCGATTTCTTCCAACGCTTGATGAGGAAATGGCGGACCAATGTAGATGAGGGATGTGCGTTTGAGAATGAACGAAGACATGAATGTGAAGAACTTGTGACCTTCATAACTTAG 453 0.5011 MSFLSGYDLSGLFETNQKTVAVFTSKCSASIMVNIAMAAKGLSFMVTEVKDFKIRLQETVVEKKRQLAITTEVFEVAVTVGGIGEEAVVDEFESVELVGGGVEAAEDGGEFASIDFFQRLMRKWRTNVDEGCAFENERRHECEELVTFIT 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00403 150 Pfam NAF domain 2 47 IPR004041 GO:0007165
Vian6g00403 150 Gene3D Kinase associated domain 1, KA1 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00403 Vian-Chr6 17273761 17294532 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00403 2 81 CBL-interacting serine-threonine protein kinases AT5G25110 44.444 2.87e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00403 - - gmx:100780478 93.5893