LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vian6g00394	ATGTCGAATTTGCCCCAATCGTTGTCTATGGGTGCGGCCTTTGGTGGCGGCGGTCCGCCATCTTCGTCCGGTGGGACTGGAGCACAGGGCTCCGGTGGGGGCAAAGATCGGAAGATGGCATCTGCTGAGCAACTGGTATTGGAACTCAGCAACCCTGAACTCCGAGAAAATGCGCTTCTGGAACTGTCCAAGAAGAGGGAGCTATTTCAAGATCTGGCTCCTTTGTTATGGAATTCTTTTGGTACTATTGCTGCACTTTTGCAGGAAATAGTTTCAATTTACCCAGTTCTTTCACCACCAAATCTTACTCCTGCACAATCAAATCGAGTGTGTAATGCTCTTGCTCTTCTTCAGAACACCAAAGTGTGCATGATTAACAATACAACAATATGGAATCCTTTCATCCATATGGCTGGAAAAAGCTTGGTTATTGTTGGAATATGTAAAGGAGCTCATATACCTTTATATCTGTACCCCTTCCTTAATACAACAAGCAAGTCAAGACCATTTGAGTACTTGAGGCTTACCAGTCTTGGTGTCATCGGTGCATTGGTGAAGGTAGCAACATTTATTGTTCAAAAAATTCTTTTGGACGATGTCGGCCTGGACTATATTTGTACTACAGCCGAGCGCTTTTTTGCGGTAGGTAGAGTTTTGGGGAACATGGTGGCAGCTCTTGCTGAGCAACCCTCATCTCGTCTACTGAAGCATATCATTCGGTGCTATCTTCGTCTGTCAGATAATCCAAGGGCTTGCGATGCATTAAGAAGCTGTCTACCAGACATGTTAAGAGATGCCACTTTCAGCAGTTGCCTTCGTGAAGACCCCACAACTAGAAGGTGGCTACAACAATTGCTTCACAATGTTGGAGTGAATAGAGTTCCTGCACTACAAGCTGGAGGTGGTTTCGATCATATGATTGTTACCTGA	930	0.4516	MSNLPQSLSMGAAFGGGGPPSSSGGTGAQGSGGGKDRKMASAEQLVLELSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQNTKVCMINNTTIWNPFIHMAGKSLVIVGICKGAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDPTTRRWLQQLLHNVGVNRVPALQAGGGFDHMIVT	309

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vian6g00394	309	PANTHER	UNCHARACTERIZED	38	187	IPR007216	GO:0006402\|GO:0030014
	Vian6g00394	309	MobiDBLite	consensus disorder prediction	1	37	-	-
	Vian6g00394	309	Gene3D	-	34	187	IPR011989	-
	Vian6g00394	309	Pfam	Cell differentiation family, Rcd1-like	45	187	-	-
	Vian6g00394	309	Gene3D	-	188	293	IPR011989	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vian6g00394	Vian-Chr6	16983123	16995801	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	Rcd1-like	Vian6g00394		Rcd1	1.1e-45	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vian6g00394	K12606		-	gmx:100784529	483.796