Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00345 ATGTTATTGCACGAAGTGCCATCGTTGGGATTTGAGGTCTACAATGTGTGCGTGAATCATCCAATGAAGATAATATCCGATGGCATATGGACACAACATGGAAGTGCATTACCTACACAGTATTCATACACCATGCTTGAGCTTCAAATACTTATCATCTTCGTGGTCACGCAAGGCTTTCATTTCATTCTCAATCGATTAGGCGAGTTGAGATCAAAGTTTTGTTTTTCAGACAGGGTTTCTGATGGGGCCATCAGTTCCGACAGGACCATTGGAAAAGTACAAGAAGATGCTGTTCCCGTTCGGGAGTCCAGACATCCTAAGCACACTATCATCGTTAGGGTACTCCTTCTACCTGTTCCTGAACTCAGTGCAGATGGACCTAAGCTTGATCACGAAAACAGGGAGAAAGGCTTGGGTGATAGGGCTTTGCTGCTATGGCATTCCCATAGTGGTGGGGTTAGTTGCTCCTTCGCTGTCATTTCATGGTTGCTCAATGACCTCAGAATCCTCAACTCCGAACTCGGACGCCTCGCACTCTCCGCAGCTTTTGTTAACGATGTTGCAGGTGGACTCTGGGCAGGGATTGGTGCTGCATATTTCGGGAGACAGAACATGAGCATGTCTATCCGTATTAGAAACGTTACGGCATTTCTTGCTTACGCAATCTTCATTCTTCTTATTGGTCGTCCTGCGATGAGGTGGATCGTGAAGAGGACCCCAGAAGGTAGATCGGTTAACAAGGGATACATCTACGCCATCATAGTAGTGTTCTTGGGATTGGGCTACTTTGCCAAGTTTTTCGGTGAACCCTTCTTAGTAGGAGCTGTTATTTTTGGACTTGCAGTCCCTGAGGGTCCTCCTCTGGGTTCTGCACTCGTTACCCAACTTGAGCTGTTCTCCAAGTGGTTCCTCTGCTCCATTTTTGTCACATGTGTCACCATGAAGGTGGATCTCACAAAATGTAACTCTCTCTCCTTCGTAATTGTCATTTCTGGTGTCATCATTATGGTGCACCTGGTTAGGTGGCTTTTGTGCATGGGAATTTGCCGATACTGCAAGATTCCCTTCAAGGATGGCTTTTGTCTTGCTCTCATTTTGAGCTGCAAAGGGGTTGTTGATATCTGCTCCTATCTCCTAGTCTACGATGCCATGGTACAAAAGAGAACAGTAGTAGATGTTATGATCGTCTCAGTGTTGGTCCTAGGTACGGCTTCGAGGTTTGGTGTGAAGGCATTGTATGACCCTTCAAGGAAATACGCAGGGTACCAGCATAGGAACATCATGAGCTTGAAACACAGTGAACTTCGGATAGTTGCATGCATCCACAAGCCATGGCACTCGGTTCACATCAAGAACGTGCTCGAATTTTGCTCCCCGGCACCAGATAACACACTGGTAGCAGAAATTTTGCACCTCATGGAGCTAGTTGGAAGGTCCAATCCCATTTTCATTGCACACAAACTTCAGCAAAGTGCAGGATCATCATCCTACAACTACTCTGGGGAACTCATTGTAGCCTTTGACCTTTTCGAACGTGACTATCTTGGTGCTGTCACTGCCAATACCTACACTGCCATATCCCCAGTGATGTTCATGAATGAAGATGTGTGCAACCTTGCTTTGGACAAAAATGCAGCCCTTATAGTCCTTCCATTCCACGTGAAATGGGGAGGGGATGGTTCAGTTGAATCAGAGGATAGCAACATAAGGGCGCTTAATGCCAGGATTTTAGAAAGGGCACCTTGCTCTGTTGGGATTCTTGTGAACCGTGGCCCTAGCTTCAACTCAAGAAGAATCAGAGCGGCCATGGTTTTCTTGGGAGGACCTGATGATAGAGAGGCCTTGTGCTTGGCTAAGAGGTTTGTCAAAGATGTTGATAATAGTTTGGTTGTGTTCAGGTTGTTGGCACACGACAAAGATACCTCCAATTGGGATCACATGATTGATGATGAAGCGATGAGGGAAATAAGTGGAGTTCATGTTAATCTAGAAAATGTTAGGTATGAAGAGATTACTATAGGAGATGCATCCCAGACAACGTTTCTCATCAAAGATATAGCCAACAAATTTGATTTTATTGTAGTTGGTAGACGCTATGGGGTCAGATCTTCTCAGACCTATGGCTTGGAGCATTGGACTGAATATTCAGAGTTAGGGGTTGTCTATGCATTTGGTTGTACATATGAGTCTCCAATTCTCCAACTGTGTTCTGATGATGAAAACAGAGAGTATGAGAGTCAGTTTGAATACAAATTTCGAGAAAAGTCTCCAACTTTCTTTAATACCCCGAAGTATGTTGGATGTTCATCTTCTGCTATTTTAAATCATGTGATCCCAATTGTTCAAATAGAATTTCCTCTTATATAA 2370 0.4447 MLLHEVPSLGFEVYNVCVNHPMKIISDGIWTQHGSALPTQYSYTMLELQILIIFVVTQGFHFILNRLGELRSKFCFSDRVSDGAISSDRTIGKVQEDAVPVRESRHPKHTIIVRVLLLPVPELSADGPKLDHENREKGLGDRALLLWHSHSGGVSCSFAVISWLLNDLRILNSELGRLALSAAFVNDVAGGLWAGIGAAYFGRQNMSMSIRIRNVTAFLAYAIFILLIGRPAMRWIVKRTPEGRSVNKGYIYAIIVVFLGLGYFAKFFGEPFLVGAVIFGLAVPEGPPLGSALVTQLELFSKWFLCSIFVTCVTMKVDLTKCNSLSFVIVISGVIIMVHLVRWLLCMGICRYCKIPFKDGFCLALILSCKGVVDICSYLLVYDAMVQKRTVVDVMIVSVLVLGTASRFGVKALYDPSRKYAGYQHRNIMSLKHSELRIVACIHKPWHSVHIKNVLEFCSPAPDNTLVAEILHLMELVGRSNPIFIAHKLQQSAGSSSYNYSGELIVAFDLFERDYLGAVTANTYTAISPVMFMNEDVCNLALDKNAALIVLPFHVKWGGDGSVESEDSNIRALNARILERAPCSVGILVNRGPSFNSRRIRAAMVFLGGPDDREALCLAKRFVKDVDNSLVVFRLLAHDKDTSNWDHMIDDEAMREISGVHVNLENVRYEEITIGDASQTTFLIKDIANKFDFIVVGRRYGVRSSQTYGLEHWTEYSELGVVYAFGCTYESPILQLCSDDENREYESQFEYKFREKSPTFFNTPKYVGCSSSAILNHVIPIVQIEFPLI 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00345 789 Pfam Sodium/hydrogen exchanger family 157 401 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vian6g00345 789 Gene3D - 152 421 IPR038770 -
Vian6g00345 789 PANTHER CATION/H + ANTIPORTER 156 722 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00345 Vian-Chr6 12950830 12955192 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00345 157 722 Antiporter Super Family AT3G44900 37.313 7.92e-117 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00345 K26731 - gmx:100797272 840.106