Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00344 ATGAATTTCAACCAAACCATCTTCTCTTCGGCCACGCTGCTGGTCAGCATCCCTCTCTCACGACGTGAGATCTACAACGTGTGCATGGATCAGCCCATGAAGATTATCTCCGATGGCATTTGGAACCACCCCAATGGTTCATCGCCCGCACAATCTGCATACACCATGCTTCAGATTCAAATGGTTATAATCTTTGCCATCACTCAAGCCTTTCATTTCATTCTCAAGCAATTTGGGTTCCCCTATTTCGTTTCACAAGTCATGGCTGGTTTTCTGCTAGGGCCAACAATTCCGACAGGACCATTCGAAAAGTACAAGAAGATGTTGTTCCCTTTTGGGAGTGCTGATATCCTGAACACGGTGTCATCGTTAGGGTTCTCATTCTTCCTCTTCATAACCTCAGTGCAAATGGACCTGAGCTTGATCACGAAAACGGGGAAGAAAGCATGGGTCATGGCACTTTCCTCCTACTTCGTCTCCATAGCTATTGGGTTTTCCGTCATGAACTTGTTGTCTTCCCAGCTGGAACAAATAAATGATGATTATGACAGTTTCTCGAGCTTGCCAATGGTCATAGTAACTCAGGGCGGCGTTTCCTTCGCCGTCGTCTCCACCTTGCTCAACGACCTCGGAATTCTCAACTCCGAACTCGGTCGCCTTGCCCTCTCCACAGCTTTCGTCAATGACCTAACTGGTGGAATCGCAGCAGGGTTCGGCGCAGACTATGTGAAAAGCGTGCAGTTGGGATTTCCTATTCTAGTCACAAACGTGGTGGCGTTTTTTGTTTACCTAATCTGCATTCCACTGATTGGGCGACCGGCGATGAAGTGGATTGTGAAGAACACCCCAGAAGGGAAACCCGTGAGCAAGATATATATCTATTCCATCATTGTGTCGTTTCTGGGATTAGGGTTCTTCGCTGGGTATTTCAACCAACCTTTCTTAGTAGGGGCTATAATTTTAGGCCTTGCAGTCCCTGAAGGTCCACCGTTGGGGTCAGAATTGGTTTCCCAACTTGAGTTGTTTTGCAGTTGGTTCCTCACCTCAATTTTTGTCACATGTTGCACCATGAAGGTGGATCTCAAAGCCTGTGTACCTTTATCCTTTTTTGTGGTCGTGTTCTTCTTCATTCTATTAGCCCAATTGATTAAGATACTATTGTGCATGGGAATTTGCCGCTACTGTAAAATGCCCTACTCTGATGGTTTCTGCCTTGCTCTCATTTTGAGCAGCAAAGGTGTTGTGGATGTCTGCTCCTATGTCCTCATGTTCGATTCAATGGCACAAAACAAACAAGTAATAGGGGTTTTGATCGTGTCGGTGTTGGTTCTGGGAACAACTTCGAAGATTGGTGTGAAAGCACTGTATGACCCTTCAAGGAAATACGCAGGGTATCAAAAAAGGAACATCATGAGCTTGAAGCAAAATCATGAGCTTAGGATTGTTGCATGCATCCAAAAGACATACCAAGTGATTCACATGAAAAACGTGCTCCAGCTGTGTTCTCCTTGTCCAGAGAACACACTGGTGGCAGATATTCTGCATCTGATGGAGCTGGTTGGAAGGTCCACTCCCATTTTCATTGCACACAGACTTCAGCAAAAGGTGGGGTCCTCCTACAACTACTCCGGGGAACTCATCGTGACCTTTGACCTTTTTGAACGTGACTATGCGGGTTGTGCCACCGCCAACACCTACACTGCCATATCCCCAATGGCACTGATGCATGAAGATGTGTGTCACCTTGCTCTGGACAAAAACGCAGCCATTATAATCCTTCCATTTCATCTGAAATGGGGAGGGGATGGTTCGATTGAGTTAGAGGACAACAACATAAGGTCATTTAACTCAAGGGTTTTGGAAAGGGCACCTTGCTCCATTGGGATTCTTGTGAGCCGTGGCCCTGCTGGGTTCAGCGCAGCAAATTACAAAGTGGCCATGGTTTTCTTGGGAGGAGCAGATGACAGAGAGGCCTTGTGCTTGGCTAAGAGGTTCACCAAAAACCTTGGCAACAGGTTGTTTGTGTATAGGTTGGTTGCATACGATCGTGATATGTCGAATTGGGAAGACATGATTGATGATGAGGAGTTGCGGGAGGTGCGTGGAGCCTATGGAAAACTTGAAAATGTTACATACGAAGAGCACACCATAGAAGATGCATCTCAGACAACGGTTTTCATCAAAGACATAGCCAACAAATTTGATTTTATCATGGTTGGAAGACGCTACGGAATGAGATCTTCTCAAACCTATGGGTTGGAAAATTGGACTGAATATTCGGAGTTGGGAGTCATCGGAGATTTGCTTGCTTCACCTGATATGGAGACTAGGGCTTCTGTTTTGGTTGTCCAACAACAGTCAACGGCTGTGTCATGA 2376 0.4604 MNFNQTIFSSATLLVSIPLSRREIYNVCMDQPMKIISDGIWNHPNGSSPAQSAYTMLQIQMVIIFAITQAFHFILKQFGFPYFVSQVMAGFLLGPTIPTGPFEKYKKMLFPFGSADILNTVSSLGFSFFLFITSVQMDLSLITKTGKKAWVMALSSYFVSIAIGFSVMNLLSSQLEQINDDYDSFSSLPMVIVTQGGVSFAVVSTLLNDLGILNSELGRLALSTAFVNDLTGGIAAGFGADYVKSVQLGFPILVTNVVAFFVYLICIPLIGRPAMKWIVKNTPEGKPVSKIYIYSIIVSFLGLGFFAGYFNQPFLVGAIILGLAVPEGPPLGSELVSQLELFCSWFLTSIFVTCCTMKVDLKACVPLSFFVVVFFFILLAQLIKILLCMGICRYCKMPYSDGFCLALILSSKGVVDVCSYVLMFDSMAQNKQVIGVLIVSVLVLGTTSKIGVKALYDPSRKYAGYQKRNIMSLKQNHELRIVACIQKTYQVIHMKNVLQLCSPCPENTLVADILHLMELVGRSTPIFIAHRLQQKVGSSYNYSGELIVTFDLFERDYAGCATANTYTAISPMALMHEDVCHLALDKNAAIIILPFHLKWGGDGSIELEDNNIRSFNSRVLERAPCSIGILVSRGPAGFSAANYKVAMVFLGGADDREALCLAKRFTKNLGNRLFVYRLVAYDRDMSNWEDMIDDEELREVRGAYGKLENVTYEEHTIEDASQTTVFIKDIANKFDFIMVGRRYGMRSSQTYGLENWTEYSELGVIGDLLASPDMETRASVLVVQQQSTAVS 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00344 791 Gene3D - 55 463 IPR038770 -
Vian6g00344 791 Pfam Sodium/hydrogen exchanger family 64 443 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vian6g00344 791 PANTHER CATION/H + ANTIPORTER 28 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00344 Vian-Chr6 12747129 12750100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00344 22 786 Antiporter Super Family AT5G22900 34.314 8.13e-150 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00344 K26731 - gmx:100797272 1203.35