Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00332 ATGGCCACCACAGCAAAGAATGTTGTGGTGATACAGGATGCATCTAAAGGACTTAATTTAAGAGTTTTTTATTGGATTATAAAGGCCTTATCACTTGAGCCTGAAGATATGGTGACTGTAGTTGCAATCCTGCATGAGGTTTATACTCCCATGGGATACAGAATCACAGTGGATAACCGGTTGGTCGGAGTAAACCAGAGAATCATCGACAAAGCACTTGCAAATAAGAAAGAAGAGTACCTGAACAACGAGGAACTTGCTCAGATTGCCAAACAATACGAATCAAATAAGGTTGGACTAAAGATAAAGCTGTTTACAGGATCTCCACTAAAAGATGTGGCTTTAGAAGTAGCCATAGACCTACAGGCAACTTGGGTGATACTTGACAGGAAAATGAAGAAAGATGAGGAGTTTTTCCTGCAGAGGCTTTCTTGTGGTATATCTATATTAAAGAGTAACGATCGGATTCTTCGACTAAGAGGGCCTTTAAATGTTCCAGATGAAATACCATGTAACAGCCATGAGACATATGATGAAAGTTTACCAAGTGTTCCATATAAACATCTTTTTGACGACATTGATGCTTTCCCCAAGAGACAACTTGAAGATGATGAACAGAACCAGATACATATTAGGCCCTGTTGCTCGAATAATAATATATATCCGACAAGTCCGAATCACCAGAGCATGGATGGAACAGAAATAAATAGCAATCAAATGATAGATAAAATAGAAAGAGCTGAGCAAGGTCACCATCATGAACAGATGCAAAGCATGTCTCTTGAGATGGTGGGGGACACGACAATTATGATTACAACTGATCAAGCAACTGCTCAGGAAATAGCTGATCAACCAAGCAAAGATGAAGAGAGGAGAAACAACTTCTTCCATGGTGAGAATTGGGACTGGAGCAATCCAGAAGAGAGTGAGGAAATGCTTGATCAACCAATAGATCATTTGCCGAGTCAGAATCATGCACAGACATCGAGCATTTTCAGTGCTGCTACATTGGATGGTGGAGAGCAAGAGAAAAGTATTTTGGAAAATTCAATGTACAATATCTGCTCTGTCTGCAAAACTAGACGACCTAATATTTGGGGCCAAAAGGAATTTACTTATGACGAACTCCTAGCAGCCACAGATGCATTTTCATTGAAGAACTGTCTCTCCAAAAGTGGATCTCTATTCACTTTCAGAGGCCAGATGGAGGGAGGGATGAAACTAGTGGTTAAGAAGCATGATGCCACTAACACTCAAGTAAGGGAGAAAGCGAAGTCAGAAATCCAAACCATCCTCAAAGCTAGACATAAAAATGTGATTATGCTCTTGGGCTCATCTACAGCAGAATCTTTCCTGTTTACTGTATATGAGTATGCTTGCAATGGTTCACTTGACAAGTATCTATCAAAAGAAAGCTCCCGACCATTGATCTGGAAAGAAAGGAAACAAGTGGTAATAGGCCTTGCCAGAGGCCTCAAAGAGGATTATGAATACGTAGCACCAGAATTCCAGGAGAAAGGGAAGTTATCATCAAAGGCAGATGTATACTCTTTTGGTGTAGTTATTTTAGAGTTGATCGCAGGGCGAAGGACTACAGATTTCACGTCAGAACATAAAAGTCTTGTTGAATGGGCAAAGCCTCTACTTAAAAAGAAGAATTACTCAGAATTGGTGGATCCCATAATCAGAAACTCATACGAAGAGGATCACCTTCGTTGGATGGTCCAAGTAATAACAGAATGTTTGGAAAAGAATCCTAAGAAAAGGTCATCAATGAATATGGTTGTTTCTGCATTACAAGGCATAGCAGACAGTGAACTCGACCACATGACAGACGCTATTACTCCAGCTGTATCAGATTCGAGAAGTGTGCCAGAAATAAATGGTTCTCAAGATGTGGGTTCAACAAAAACTAAAGCTGATCAGCAAAATCAGAAAGTCGAGCAAATTGAGAGCATACTCGGTGGGGAAAAAAATAAGTTAAGACTAACAGTTGAGAATAATCTCTTTTACAAAGCAAACCAGGGAAACTCTGATAAACTCAGACATAATGAAGAACAGAAGCAAAGCAGGTCTCGAGGGGAGGATAGGAGCTCAGGAAAGATGATAACGAACGACCACAGAATAGACGAGACAGAAGTTGGACTGCTGAATGAGTTTGAAAACCAGATTCCAAGGACACTCCATATGGAGAGCATCACAACACAAAAAATTAGTGTTGATGGCATAATGGGTAACACAAAAGTTGACCAACTGAGCCAAGATCAAGAAGGAAATAACTTTGTTAAAATGATGGAGGTAGGCTTAATTCCAGCAACTATCAGTGCAATGATAGATCAAACAGAAGTTGATCAGCCGGTCCATGATAAAACTCAAACACAGAGAAGCTTTCATGAGAACTTACAGGATGGATGTCAAGGTGAAATAGTTTTGGAGAATTCGAAGTCCTCTGCATGCTCTATTTGTAGAAGTAGACGACCAAACAATGCATGCTCAAAGGACTTTACTTATGACGAACTTCTAGAAGCTACAGAAGGATTTTCCACTGAGAACTCTCTATCTGTAAATGAAGATGGACCTACTTTCCAAGGCCTTCTAGAGGGACGGGTAAAAATTGTTGTTAAGAAATATCAAGTCAACACCTCCCAAGAACAGAAGATAATAAACTCAGAAGCAAAGCTGCTCATCAGTGCTAGACATAAAAATGTGGTCATGCTGTTGGGTTTATGTACAAATGAAAGCCAACTGATGGTTGTGTTTGAGAAAGTATGCAACGGTTCACTTGACCAGTACCTAACAACACCTGAGTTTCTGGAAAATGGAAAACTATCTTACAAGACAGATGTATATTCCTTTGGAGTGGTTCTTTTGGAGCTGATCAGTGGCCGGAGGGCTGCGGACAAATTACCAGATGGAAAAAGCCTAGTTAACTGGGCCAGGCCCCTACTGACAGGAAAGAAGTACCACATTTTGTTGGATGGGAAAATCAGTAACTCTTGTGAAGAAGAAAAGCTAGTATGGTTGGTCCAAGTAACAGAACAATGTCTCAAAAAGAATCCTAATGATAGATATTCGATGAATGTGGTTCCCCTGGTTAAGTGGAAGTCTTCAGCTTGCCATAATTGTCCCAAAAGTCAAATGAAGGCCGATCTAGGGAAGAAACAGGAACAAGAATTGATCCACGGAAACCAATACAAGGAAGAAAGCAGTCCAAGATTGACAGTCAAAACCAATCACATGAAAGGTCATAGAAATGAAGATCAAATGATACAGGGGGAAGAAGATGTGCAGAGGAGTCCTTATGAGGAGATGTTCGGGGTAAGACCTATCAGCAATGGCATGATTGATCAGATAAACCCTGTACAACAATTCCAGGAAAAACTGCACATTAAGGGAAGCTTTGAGATAGAAGAAATGAGTAAAAATGTAGATAAACAACAAAAGGTGAGCAAGGATAAAAAACAAATACAGGGAAGCTGTGATGATAGTTTATTGAATGGGATTGAAGGCAAAATCATTTTGGGAAATTCAAAGTCTTATGCTTGCTCTATCTGCAAAAGTAGGCGACCAAACAGTAGATTGCAAAGGAAATATACTTATGAAGAGCTTCAAGCTTGTACAGAAGGATTTTCAGTTAAGTACTCTCTATGTGAAGGTGAATATGGACCTGCTTTCAGAGGCCAGCTAGAGAATAACCAGGAAATAGTGATTAAGCAACATGCGTTCACAAACTTACAGGAGCAGAAGGTGTTCATGTCAGAATTCCAATTGCTTATAAATGCCAGACATGAAAACGTGATAATGCTGTTGGGTTCATGCATACGATTAAGTCAATTGCTGATTGTATATGAGAAGGCATGCAACGGCTCTCTTGACCTGTACTTATCAAGAGAAAGTGGTAGAACACTGACTTGGGGAGAAAGGGTGAAAGTTGCAATAGGTGTCGCCAGAGGTCTAAACTATCTACATGAGAATAATATAGCACATGGAGGAATAAAACCAAGTAACATTCTTCTAAATCATGAGTTGAAACCACTGGTAGGAGACTTTGCGTTTGGAAAAGAAAGATGTGAACTGAAAAATCTCAAAAGACTTAAAAGAATGAGGAATTGTGGACGAACTGCACCAGAGTGTTGTGAGAGTGGAATACTATCAACTAAGGCAGATGTATACTCTTTTGGTATAGTTCTTGTGGAGTTGATCACTGGCCGTATGATTTCAGAAAAAGTATCAGGAGAGAGATGTCCCACTGAATGTATAAGGTCACTTCTTGAAGAACAAAAGTTTCTACAGTTGGTAGATCCCAAAGTCAGCAGCTCCTATGATGAGCAAGAACTAGTTTCATTGGTCCACGTGATAGAAAACTGTCTGAAAAAGAATCCAGAAGAAAGGTTTACAATGGATATGGTTGTCTCTGCACTGCCATCTATAGTAGATTGCAGTGACATATATGCAAAGGAAGACTTTTCACCAGAAAACTCGCATGTTTCAGAAGTAACAAACTCAAAAGTGAAGGAGGAACCACCAAATGAAGAAGATTTAAGCATAGAGAATAGTGAAGAAAAAGGGGACAACATAACTTACATTGGAGGCAATGAAACAGAAATACGTCAAGAGTGTGACATCAACCCAACTGGTTGTGAAAATAGTAAGGAAACAGAAGAAAAAGAAAGCTTAAGCACCAAGATATGTTGGGAAGGTTGTTCATCCTATGGTGGAGCTAGAGAATTTTATCTCGAAGGGATCAAAGATTTGGATCATTTAGATCTAGGTGTCAATAATTATATTAGGAAGAAGAAGGATGGTGGAAGGGTGGTGGAGAAGAGAGGGGAGAAAGGGAAGGTGGATGGTGGATGGTGTAAAAGAAAAGAAAGAAAAGAGAAAAGGGTGATGGATGGTAAAGGAAGGTGA 4911 0.3979 MATTAKNVVVIQDASKGLNLRVFYWIIKALSLEPEDMVTVVAILHEVYTPMGYRITVDNRLVGVNQRIIDKALANKKEEYLNNEELAQIAKQYESNKVGLKIKLFTGSPLKDVALEVAIDLQATWVILDRKMKKDEEFFLQRLSCGISILKSNDRILRLRGPLNVPDEIPCNSHETYDESLPSVPYKHLFDDIDAFPKRQLEDDEQNQIHIRPCCSNNNIYPTSPNHQSMDGTEINSNQMIDKIERAEQGHHHEQMQSMSLEMVGDTTIMITTDQATAQEIADQPSKDEERRNNFFHGENWDWSNPEESEEMLDQPIDHLPSQNHAQTSSIFSAATLDGGEQEKSILENSMYNICSVCKTRRPNIWGQKEFTYDELLAATDAFSLKNCLSKSGSLFTFRGQMEGGMKLVVKKHDATNTQVREKAKSEIQTILKARHKNVIMLLGSSTAESFLFTVYEYACNGSLDKYLSKESSRPLIWKERKQVVIGLARGLKEDYEYVAPEFQEKGKLSSKADVYSFGVVILELIAGRRTTDFTSEHKSLVEWAKPLLKKKNYSELVDPIIRNSYEEDHLRWMVQVITECLEKNPKKRSSMNMVVSALQGIADSELDHMTDAITPAVSDSRSVPEINGSQDVGSTKTKADQQNQKVEQIESILGGEKNKLRLTVENNLFYKANQGNSDKLRHNEEQKQSRSRGEDRSSGKMITNDHRIDETEVGLLNEFENQIPRTLHMESITTQKISVDGIMGNTKVDQLSQDQEGNNFVKMMEVGLIPATISAMIDQTEVDQPVHDKTQTQRSFHENLQDGCQGEIVLENSKSSACSICRSRRPNNACSKDFTYDELLEATEGFSTENSLSVNEDGPTFQGLLEGRVKIVVKKYQVNTSQEQKIINSEAKLLISARHKNVVMLLGLCTNESQLMVVFEKVCNGSLDQYLTTPEFLENGKLSYKTDVYSFGVVLLELISGRRAADKLPDGKSLVNWARPLLTGKKYHILLDGKISNSCEEEKLVWLVQVTEQCLKKNPNDRYSMNVVPLVKWKSSACHNCPKSQMKADLGKKQEQELIHGNQYKEESSPRLTVKTNHMKGHRNEDQMIQGEEDVQRSPYEEMFGVRPISNGMIDQINPVQQFQEKLHIKGSFEIEEMSKNVDKQQKVSKDKKQIQGSCDDSLLNGIEGKIILGNSKSYACSICKSRRPNSRLQRKYTYEELQACTEGFSVKYSLCEGEYGPAFRGQLENNQEIVIKQHAFTNLQEQKVFMSEFQLLINARHENVIMLLGSCIRLSQLLIVYEKACNGSLDLYLSRESGRTLTWGERVKVAIGVARGLNYLHENNIAHGGIKPSNILLNHELKPLVGDFAFGKERCELKNLKRLKRMRNCGRTAPECCESGILSTKADVYSFGIVLVELITGRMISEKVSGERCPTECIRSLLEEQKFLQLVDPKVSSSYDEQELVSLVHVIENCLKKNPEERFTMDMVVSALPSIVDCSDIYAKEDFSPENSHVSEVTNSKVKEEPPNEEDLSIENSEEKGDNITYIGGNETEIRQECDINPTGCENSKETEEKESLSTKICWEGCSSYGGAREFYLEGIKDLDHLDLGVNNYIRKKKDGGRVVEKRGEKGKVDGGWCKRKERKEKRVMDGKGR 1636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00332 1636 MobiDBLite consensus disorder prediction 678 705 - -
Vian6g00332 1636 SUPERFAMILY Protein kinase-like (PK-like) 367 619 IPR011009 -
Vian6g00332 1636 PANTHER OS01G0253100 PROTEIN 280 493 - -
Vian6g00332 1636 Pfam Protein tyrosine and serine/threonine kinase 402 493 IPR001245 GO:0004672|GO:0006468
Vian6g00332 1636 Pfam Protein tyrosine and serine/threonine kinase 934 1027 IPR001245 GO:0004672|GO:0006468
Vian6g00332 1636 Pfam Protein tyrosine and serine/threonine kinase 868 933 IPR001245 GO:0004672|GO:0006468
Vian6g00332 1636 Pfam Protein tyrosine and serine/threonine kinase 1213 1474 IPR001245 GO:0004672|GO:0006468
Vian6g00332 1636 Pfam Protein tyrosine and serine/threonine kinase 496 599 IPR001245 GO:0004672|GO:0006468
Vian6g00332 1636 ProSiteProfiles Protein kinase domain profile. 241 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian6g00332 1636 ProSiteProfiles Protein kinase domain profile. 1210 1477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian6g00332 1636 MobiDBLite consensus disorder prediction 619 644 - -
Vian6g00332 1636 MobiDBLite consensus disorder prediction 1491 1519 - -
Vian6g00332 1636 Gene3D Transferase(Phosphotransferase) domain 1 1287 1496 - -
Vian6g00332 1636 Gene3D Transferase(Phosphotransferase) domain 1 493 618 - -
Vian6g00332 1636 Gene3D Transferase(Phosphotransferase) domain 1 920 1052 - -
Vian6g00332 1636 Gene3D Phosphorylase Kinase; domain 1 810 919 - -
Vian6g00332 1636 Gene3D Phosphorylase Kinase; domain 1 347 458 - -
Vian6g00332 1636 Gene3D Phosphorylase Kinase; domain 1 1176 1284 - -
Vian6g00332 1636 MobiDBLite consensus disorder prediction 674 705 - -
Vian6g00332 1636 SUPERFAMILY Protein kinase-like (PK-like) 833 1043 IPR011009 -
Vian6g00332 1636 FunFam Proline-rich receptor-like protein kinase PERK8 1172 1285 - -
Vian6g00332 1636 SUPERFAMILY Protein kinase-like (PK-like) 1192 1474 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00332 Vian-Chr6 11642621 11657994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00332 808 935 Trihelix Transcription Factor Family AT5G38560 30.000 1.10e-12 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Vian6g00332 PK_Tyr_Ser-Thr 4.6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00332 - - vun:114188408 1359.36