Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00297 ATGACTTCCTCACTCGAGAAGATCATGCAAGGCGAACAGGTCCTCACCAACGATTTTCAGGACCTTACAATCAAAGATCTGAGTGAGAAAGACAGCGAGACAGTGATTCACGAGGTAGGTAATGGAAGCCATGGGGGAATCTGTGCTATTTGTCTGGATGAGATAGTGCTGCAGGAAACTGCTCTTGTAAAAGGTTGCGAGCACGCATACTGTATCTTTTATGCTTTGGATTTGAGAATTGAAGTCAACGGCAAGTTTGTGGCTGCATTACAGTTGGTATGTACTTTCGGTTGTGTAACATGCATTCTTCGATGGGCTACGTACCGTGAGAAAGTTACTTGTCCTCAGTGTAAACATCCATTCGAGTTTCTCAATATTCATCGCACGCTTGATGGCAGCATTCAAGATTACATGTTTGAGGAGAGTGTTTGTCTGCTACTCCGTGCCTCATGGTTCAAACCTTTATCTGTTGACGAACACGTGGTTCACGAAGATGCATACGAGGAACTAGGAGATTATTATCAGTACGAGTATGAGGACGAGGACCTGGACGATGATATGGATGGAGCTTATTATGGTGGTTCGTCAAGTTTTCGTATCGGCAACCGCAGATGGGGAGATAACGGCTACGTCAGGGCTGGTCGACAAGAAGCTCGGCCAGTTAACCGAGCGAACATCCAGGATTCAGGAGCAAGTTCATCGCGAGAGCCGAAAAAGAAAGAGGTTGGGAAAAGTAGCACAGGCAGAAGGGCAAAGAGAGCACAGAAAAGGGAAGCTGCTGATAAGGCTGCTGAAGCAAAACATCAGCAGCATTTGGTAAGGCTGGGTAGGAAGTGA 837 0.4648 MTSSLEKIMQGEQVLTNDFQDLTIKDLSEKDSETVIHEVGNGSHGGICAICLDEIVLQETALVKGCEHAYCIFYALDLRIEVNGKFVAALQLVCTFGCVTCILRWATYREKVTCPQCKHPFEFLNIHRTLDGSIQDYMFEESVCLLLRASWFKPLSVDEHVVHEDAYEELGDYYQYEYEDEDLDDDMDGAYYGGSSSFRIGNRRWGDNGYVRAGRQEARPVNRANIQDSGASSSREPKKKEVGKSSTGRRAKRAQKREAADKAAEAKHQQHLVRLGRK 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00297 278 Coils Coil 249 269 - -
Vian6g00297 278 SUPERFAMILY RING/U-box 47 72 - -
Vian6g00297 278 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 8 278 - -
Vian6g00297 278 MobiDBLite consensus disorder prediction 233 271 - -
Vian6g00297 278 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 25 122 IPR013083 -
Vian6g00297 278 MobiDBLite consensus disorder prediction 216 278 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00297 3 278 C3H Transcription Factor Family AT5G19430 51.399 2.72e-84 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00297 - - gmx:100785472 358.221