Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00285 ATGGAACGAAGTGGTGGGATGGTAACTGGGTCGCATGAAAGGAATGAACTTGTTAGAGTTAGACACGGTTCCGATAGTGGGTCTAAACCCTTGAAGAATTTAAATGGTCAGATTTGTCAAATATGTGGTGATACCATTGGATTAACGGCTACTGGTGATGTCTTTGTTGCTTGTCATGAGTGTGGCTTCTCACTTTGTCATTCTTGTTACGAGTATGAGCTGAAAAATGTGAGCCAATCTTGTCCCCAGTGCAAGACTAGATTCACAAGTCAGCAAGAGGGTGCTGGAGTGGAGGGTGATGATGATGAAGAAGAAGATGCTGATGATCTAGATAATGAGATCAACTATGGCCAAGGAAACAATTCCAAGGCAGGGATGCAATGGGAAGAACAAGAAGATGCTGACTTCTCTTCATCATCTGGACATGATTCTCAAATACCAAATCCCCATCTAGCAAACGGGCAACCGATGTCTGGTGATATTCCATATGCTACTTCTGATGCTCAATCTATGCAAACTACATCAGGTCCTATGGCTAATACAAAGCAACCGGGTCTTGAAAGTGATGAAGAGATAAGGAGAGTGCCAGAGATTGGAGGGGAAAGTGGTGGAACTGCAGCCTCTCGGCCGGAAGCTGGTTCAAATGCTGGTGCAGAACGTGCTCAGGGGACGGGAGAGGGTCAGAAGAAGAGAGGGAGAAGCCCAGCTGATAAAGAAAGCAAGCGGCTTAAGAGGCTATTGAGGAACAGAGTTTCGGCCCAACAAGCGAGGGAGAGGAAGAAGGCTTACTTGATTGATTTGGAAACAAGAGTCAAAGACTTGGAGAAGAAGAATTCAGAGCTCAAGGAAAGACTTTCTACTTTGCAGAATGAGAACCAAATGCTTAGACAAATATTGAAGAACACAACAGCAAGCAGGAGAGGGAGCAATAGTGGTACCAATAATGCTGAATGA 954 0.4486 MERSGGMVTGSHERNELVRVRHGSDSGSKPLKNLNGQICQICGDTIGLTATGDVFVACHECGFSLCHSCYEYELKNVSQSCPQCKTRFTSQQEGAGVEGDDDEEEDADDLDNEINYGQGNNSKAGMQWEEQEDADFSSSSGHDSQIPNPHLANGQPMSGDIPYATSDAQSMQTTSGPMANTKQPGLESDEEIRRVPEIGGESGGTAASRPEAGSNAGAERAQGTGEGQKKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLIDLETRVKDLEKKNSELKERLSTLQNENQMLRQILKNTTASRRGSNSGTNNAE 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00285 317 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 239 302 IPR004827 GO:0003700|GO:0006355
Vian6g00285 317 MobiDBLite consensus disorder prediction 224 259 - -
Vian6g00285 317 MobiDBLite consensus disorder prediction 1 29 - -
Vian6g00285 317 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 166 314 IPR044280 GO:0000981|GO:0045944
Vian6g00285 317 MobiDBLite consensus disorder prediction 90 259 - -
Vian6g00285 317 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 244 259 IPR004827 GO:0003700|GO:0006355
Vian6g00285 317 SMART brlzneu 237 301 IPR004827 GO:0003700|GO:0006355
Vian6g00285 317 MobiDBLite consensus disorder prediction 1 26 - -
Vian6g00285 317 Gene3D Single helix bin 260 301 - -
Vian6g00285 317 Coils Coil 236 305 - -
Vian6g00285 317 FunFam Cellulose synthase A catalytic subunit 1 [UDP-forming] 22 113 - -
Vian6g00285 317 CDD bZIP_HY5-like 242 293 - -
Vian6g00285 317 MobiDBLite consensus disorder prediction 159 182 - -
Vian6g00285 317 FunFam Transcription factor HY5 260 301 - -
Vian6g00285 317 SUPERFAMILY RING/U-box 23 108 - -
Vian6g00285 317 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Vian6g00285 317 SUPERFAMILY Leucine zipper domain 241 299 IPR046347 GO:0003700|GO:0006355
Vian6g00285 317 CDD mRING-HC-C4C4_CesA 37 87 - -
Vian6g00285 317 MobiDBLite consensus disorder prediction 96 112 - -
Vian6g00285 317 MobiDBLite consensus disorder prediction 114 152 - -
Vian6g00285 317 Pfam bZIP transcription factor 238 299 IPR004827 GO:0003700|GO:0006355
Vian6g00285 317 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 113 IPR013083 -
Vian6g00285 317 Pfam Zinc-binding RING-finger 29 105 IPR027934 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00285 Vian-Chr6 9147780 9151346 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00285 1 188 Glycosyltransferase AT4G32410 55.319 1.73e-53 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian6g00285 zf-UDP 1.3e-35 CL0229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00285 K10999 - gmx:548004 549.666