LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vian6g00270	ATGAATAAGTTGCTGATGGAGGAGAACGATAGGTTGCAGAAACAGGTGTCTCAACTGGTGTATGAAAATGATTATTTTCGTCAACACACTCAAAATCGGTTTGGCAAAACTCCCGTTAATACCAGCGGTTTTGCAAAATCTCTGTTAATACTGGCGATTTCTCAAAAAACTGTCGACAAACATGGGATTTTTGAACTCAGTTGTTCTACCGGATCGGTTGCTCAAGACCTTTGGTCTCTACCCGAACCTGATGAAAAAAATGGGATCACATCTTATGAACTCGTTGAGAATAATTCTGATCTAGTTCATGGCCTATTAGAAGTAGAATGCGCTCTGGTGAGATCCTCACACAAACATGAGATTTTTGAACTCAGTTGTTCTACGGGATCGGTTGCTCAAGACCTTTGGTCTCTACCCGAACCTGATGAAAAAAATGGGATCACATCTTATGAACTCGTTGAGAATAATTCTGATCTAGTTCATGGCCTATTAGAAGTAGAATGCGCTCTGGTGAGATCCTCACACAAACATGAGATTTTTGAACTCAGTTGTTCTACGGGATCGGTTGCTCAAGACCTTTGGTCTCTACCCGAACCTGATGAAAAAAATGGGATCACATCTTATGAACTCGTTGAGAATAATTCTGATCTAGTTCATGGCCTATTAGAAGTAGAATGCGCTCTGGAGGTGTTTGCACCTCCCAAATGTCAGCCTACACCTACAAAAAGATGTTACTATCCTACACCGGTGTGA	753	0.413	MNKLLMEENDRLQKQVSQLVYENDYFRQHTQNRFGKTPVNTSGFAKSLLILAISQKTVDKHGIFELSCSTGSVAQDLWSLPEPDEKNGITSYELVENNSDLVHGLLEVECALVRSSHKHEIFELSCSTGSVAQDLWSLPEPDEKNGITSYELVENNSDLVHGLLEVECALVRSSHKHEIFELSCSTGSVAQDLWSLPEPDEKNGITSYELVENNSDLVHGLLEVECALEVFAPPKCQPTPTKRCYYPTPV	250

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vian6g00270	250	Coils	Coil	2	22	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vian6g00270	Vian-Chr6	8704745	8731808	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vian6g00270	1	42	Homeobox Transcription Factor Family	AT4G32880	73.810	1.12e-12	65.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vian6g00270	-		-	gmx:3989340	92.0485