Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00254 ATGAAGAATTCTAAGAAAACGGGTGTACGGAAATACCAAAAATCAGAAAATCCACGTCTGCGATGGACACCTGAACTCCATGAATACTTTGTAGAAGTTGTGGAAGGTCTTGGTGGAAAAAACAAGGCAACTCCAAAGAGCATTCTGCAGATGATGCATGTGAAAGGACTAAGAATCTCTCACATTAAAAGCCATCTTCAGATGTACAGGAACCTGAAGGGGCATACGTTTCTCTCATCAATGCATAAGGAGATGGAAGGGAATGAAGATGGTAAAGATCTTCCAATGTGCTCCAATTGTTCATCCCAAAGATCACAAGAAGCAAAATTTAGGGCATCAAAATATGAAATGGGAATTGTGACTCAAGAAATTCGACCGTCAGAAAATAAAGGACTTTCACAAACCAGTGAAACAGATTACGATCTAAATCAGCTTCCTGACATGTGTTACGAGTATAAACCAATGTATGGTCCATGTGTGCCTTATTTGGCTGATGAAAACACTGGGCCTCCAGATTCAAGATGTTGTGCTGGAGCTGCTCACGAGTTTAACAAAGCAAACAATCCTGCAGCCACAAAGAAGTTTTGTGCTTGTATGTATGACACTTTGCTAAATTTAGGGTTTTATCCCAAAAAATGGAAACAGCTCCAAGGAACCTGCAGGTTTAAGATTTCATTTTCTATTGAAAAGTGTGTAACTGGTGGAGGTAGTTATTCAACCGCTAAATACATTCACGACAATTGA 744 0.3952 MKNSKKTGVRKYQKSENPRLRWTPELHEYFVEVVEGLGGKNKATPKSILQMMHVKGLRISHIKSHLQMYRNLKGHTFLSSMHKEMEGNEDGKDLPMCSNCSSQRSQEAKFRASKYEMGIVTQEIRPSENKGLSQTSETDYDLNQLPDMCYEYKPMYGPCVPYLADENTGPPDSRCCAGAAHEFNKANNPAATKKFCACMYDTLLNLGFYPKKWKQLQGTCRFKISFSIEKCVTGGGSYSTAKYIHDN 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00254 247 Gene3D - 148 234 IPR036312 -
Vian6g00254 247 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 107 IPR046955 GO:0003700
Vian6g00254 247 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 149 228 IPR036312 -
Vian6g00254 247 Gene3D - 17 73 - -
Vian6g00254 247 SUPERFAMILY Homeodomain-like 16 71 IPR009057 -
Vian6g00254 247 FunFam Two-component response regulator 13 76 - -
Vian6g00254 247 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 74 IPR017930 -
Vian6g00254 247 Pfam Myb-like DNA-binding domain 20 70 IPR001005 -
Vian6g00254 247 NCBIfam myb-like DNA-binding domain, SHAQKYF class 17 71 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00254 Vian-Chr6 8077547 8087307 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00254 8 70 G2-like Transcription Factor Family AT1G14600 68.254 1.46e-23 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vian6g00254 Myb_DNA-binding 3.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00254 - - vun:114187568 291.967