Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00250 ATGGTAACCATCAAAGCGTCTTACACAGTAGTTCCGAATCAACCAACTCCAGGAGGTATTCAATGGCTCTCTGATATCGATCAAGTGGCGCGTCTGTGCCATACACAGACCATCTACGTTTTCCATGCACAGCACAACCATGACGCATTAGTTGAACAGATGAGAAACTCTCTTAGCAAGATTTTGTCGCATTACTATCCAGTTGCTGGTAGATTGAGAAGGTTAGAAGAAGGTGGCAGATGGGAATTGGATTGTAATGCAAAAGGAGCGGTGTTGATTGAAGCAGAATCCACAAAAACAGTGAACTATTATGGTGACTTTTTGGGTGAATCCGCCAATGACTTGGTTCCAACAGTCAATTACACAAACACCTTCATTGAGGAACTTCCCTTGTTACTAGTGCAAGTAACAAGCTTCCTTGGTGATGAAGCGTTTTCCATTGGAGTTGCTGTATCTCATCTCTTGTTTGATGGTATTTCTGCCATTCACTTCATCAATTCATGGGCAAAGTTGGCTCGTGGAGACACATTAGAGCCCCATGAAATGCCCTTTCTGGATCGAACTGTGCTAAAATTCACTGATCCTCCATCAACCTCACGCTTTGATCACCAAGAGTTCAAGCCTATGCCTCTCATATTAGGAAGAAGTGACAACACTGTTGAGAGAAACAAGAGGGTAAATGCCACTACGTTGAAGCTGACAGCAGAACAAGTGGGGAAGTTGAAGAACAAGGCGAATGCTGATAAATCAACGAAAGGGTCAAGACCTTATAGCAGATTTGAGGCTATTGCTGCACATGTGTGGAAATGTGCATCTAAGGCTCGTGGATTAGATGAGAATCAACCAACGCTGCTTCGGTTCAGTGGTGATATTCGCAGTAGACTCATTCCACCTCTCCCTAGGAATTACATTGGTAATGCTTTGTCCATAGTATCAGCATCATCACGCGTTGGAGAAATCTTATCAAGTCCTTTGGCTCATGTTGCTCAGAAAATAAGGGAATCTGTTGAAATGATTACACATGAGTTTATATGCGCACAGATAGATGTGATTAGAAGTCAGGACCATGTGAATAAAGCGAGAACTTTGTACTATGGAGCAAATGAAGGCAAGGATGTATTGTTTTTTGGGAATCCTAACTTACGTATTACAAGTTGGCTGAGTATGCCAATGCATGAAGCAGATTTTGGTTGGGGAAAGCCTGTGTATGTAGGTCTGGCAGGTGTGGTTAGACAAGAGAGGGCAGTGATTACCCAAAGTCCAGATGGTGATGGCTCTGTTATTCTGGTTCTACACTTTCAAGTGGAACATATGCAGCTTTTCAAGAACTATTTCTATAAAGAAATATAA 1350 0.4237 MVTIKASYTVVPNQPTPGGIQWLSDIDQVARLCHTQTIYVFHAQHNHDALVEQMRNSLSKILSHYYPVAGRLRRLEEGGRWELDCNAKGAVLIEAESTKTVNYYGDFLGESANDLVPTVNYTNTFIEELPLLLVQVTSFLGDEAFSIGVAVSHLLFDGISAIHFINSWAKLARGDTLEPHEMPFLDRTVLKFTDPPSTSRFDHQEFKPMPLILGRSDNTVERNKRVNATTLKLTAEQVGKLKNKANADKSTKGSRPYSRFEAIAAHVWKCASKARGLDENQPTLLRFSGDIRSRLIPPLPRNYIGNALSIVSASSRVGEILSSPLAHVAQKIRESVEMITHEFICAQIDVIRSQDHVNKARTLYYGANEGKDVLFFGNPNLRITSWLSMPMHEADFGWGKPVYVGLAGVVRQERAVITQSPDGDGSVILVLHFQVEHMQLFKNYFYKEI 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00250 449 Gene3D - 214 447 IPR023213 -
Vian6g00250 449 Gene3D - 1 208 IPR023213 -
Vian6g00250 449 Pfam Transferase family 1 446 - -
Vian6g00250 449 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00250 Vian-Chr6 7788073 7789714 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00250 2 447 Monolignol Biosynthesis Gene Families AT5G48930 34.598 1.08e-85 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00250 K13065 - gmx:100778626 677.552