Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00245 ATGTGTTCTGAAAATGGAGATTTCTCTGTGAGTGTGACGAATGAAGAGGTGGTGGCAGCAGTGTTACCAATGCAGGAACATTGGCTTCCACTCTCTAACCTTGACCTGCTTCTACCTCCATTGGATGTAGGAGTATTCTTTTGCTACAAGAACCCTATTATCACATCCACAACCATGGAAGATAGTGCCACCAACAAAATCAGCTTTGGAACCATGGTGGAGTCTTTGAAGAAGGCCTTGGCTCAAACCCTAATCTCTTATTATGTCTTTGCAGGTGAAGTGATCCTCAACAGCATGGGTGAACCTGAAGTTCTCTGTAACAATCGTGGTGTTGATTTTCTTGAAGCTCAGGCAGATGTTGAACTCAAGAACCTCAACTTTTACAATCCAGACCAATCTATTGAAGGCAAATGTGCGTTACTTGATATTGAATCATTCTTTATGGCAACTTCACTGAAGTGTGGAGGAATAATAGTGGCATGCACATTTGACCATCGCATAGCAGATGCATATTCAACAAACATGTTTCTTGTGTCATGGGCTGCCATGGCCCATCCCACCACCGCCATTCCTGCCGCCACTTCTTGTCATCCATGTTTTCGTCGCTCTCTCCTCAACCCTCGTCGTCTAGGTTTCATTCGCCCTTCTCAGCACCACATGTACACCTCCATCTCCGACCTTCCTCCCGCTTCCGTCACGTACGCTAACGCTCTCCTCAGTCGAATATATTACATCACGGAAGAACAACTCTGCCACATGCAGTCCCACGCCGTCACGCGCACTAAGCTGGAATGTTTCTCGGCTTTCTTATGGAAGATGGTTGCATGTGTAGCTTCAAGAAACACAGATAGTAAAAAGATTACTATAAAAATGGGCATTGTTGTTGATGGAAGGAAGAGACTGGGCAATGGTAACAAAGAGAGTGAAGTGGTGATGATGGAGTGTTACTTTGGGAACGTGCTTTCCATACCCTTTGGAGGGAAACTAGTTGAGGAGTTGGTGAAGGAGCCGTTAGGGTATGTGGTGGAGGCTGTTCACGAGTTTTTGTCTATCGCCACAAAGGAGCACTTCTTAGGACTAATTGATTGGGTGGAGGCTCAGAGGCCGATTCCTGGAGTGTCCAGAATTTATTGTAATCGTGCCGACGAGGGACCAGCCTTTGTAGTGTCGTCCGGTCAGAGGTTTCCAGAGAAGAAGGTGGATTTTGGGTGGGGGAAAGCGGTGTTTGCATCGTACCATTTTCCTTGGGGTGGTGAAACTGGTTATGTTATGCCAATGCCAAGTCCTTTGGGGAATGGTGATTGGGTTGTGTACATGCACCTTGCAAAGAGGCACTTAGACATCATAGAGATTGAAGCTGCTCATGTGTTTAAGCCCTTGACTTGGGACTACCTTAACCAATAA 1404 0.4623 MCSENGDFSVSVTNEEVVAAVLPMQEHWLPLSNLDLLLPPLDVGVFFCYKNPIITSTTMEDSATNKISFGTMVESLKKALAQTLISYYVFAGEVILNSMGEPEVLCNNRGVDFLEAQADVELKNLNFYNPDQSIEGKCALLDIESFFMATSLKCGGIIVACTFDHRIADAYSTNMFLVSWAAMAHPTTAIPAATSCHPCFRRSLLNPRRLGFIRPSQHHMYTSISDLPPASVTYANALLSRIYYITEEQLCHMQSHAVTRTKLECFSAFLWKMVACVASRNTDSKKITIKMGIVVDGRKRLGNGNKESEVVMMECYFGNVLSIPFGGKLVEELVKEPLGYVVEAVHEFLSIATKEHFLGLIDWVEAQRPIPGVSRIYCNRADEGPAFVVSSGQRFPEKKVDFGWGKAVFASYHFPWGGETGYVMPMPSPLGNGDWVVYMHLAKRHLDIIEIEAAHVFKPLTWDYLNQ 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00245 467 Gene3D - 7 222 IPR023213 -
Vian6g00245 467 Gene3D - 223 451 IPR023213 -
Vian6g00245 467 Pfam Transferase family 9 453 - -
Vian6g00245 467 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 22 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00245 Vian-Chr6 7547507 7550720 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00245 32 450 Monolignol Biosynthesis Gene Families AT5G48930 23.918 9.10e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00245 - - gmx:100785067 681.789