Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00242 ATGTGTTCTGAAAATGGAGATTTTTCTGTGCAAGTGACGAACGAAGAGGTGGTGGCAGCAGTGTTACCAATGCAGGAACATTGGCTTCCACTCTCTAACCTTGACCTGCTTCTACCTCCATTGGATGTAGGAGTATTCTTTTGCTACAAGAACCCTATTATCACATCCAAACCCATGGAAGATAGTGCCACCAACAAAATCAGCTTTGGAACCATGGTGGGGTCTTTGAAGAAGGCCTTGGCACAAACCCTAATCTCTTATTATGTGTTTGCAGGTGAAGTCATGCTCAACAGCATGGGTGAACCTGAAGTTCTCTGTAACAATCGTGGTGTTGATTTTGTTGAAGCTCAGGCAGATGTTGAACTCAAGAACCTCAACTTTTACAACCCAGACCAATCTATTGAAGGCAAGTTTGTTCCAAAGAAGAAGAATGGTGTGCTTGTTGTACAGACCACCGCACTTAAGTGTGGAGGAATAATAGTGGCATGTACATTTGATCATCGCATATCAGATGCATATTCAACAAACATGTTTCTTGTTTCATGGGCTGCCATGGCCCACCCCACAATTACCATTCTCTCCACCACTTCCTGCCATCCATGTTTTCGTCGCTCTCTTCTCAATCCTCGTCGTCCAGGTTCCATCCACCCTTCTTTGAACCAAATGTACACTTCTATCTCCCATCTCCCTCTCCCTCCCCCTCCCACCACCACTGCCACCGCCACCGCTCTCCTTAGTCGTATATACTTTGTCACGGCAGAGCAACTTCACCATATGCAGTCCCTCGCCGTCACACGCACGAAGCTGGAGTGTTTCTCGGCTTTCTTGTGGAAGATGGTTGCATGTGCAGCTTCAAGAGACACAAATAGTAAAAGAGCTACTGTCAAAATGGGCATTGTGATTGATGGAAGGAAGAGACTAGGCAATGGTGACAAAGAGAGCGAAGCAATGATGAAGTGTTACTTTGGGAACGTGCTTTCCATACCCTTTGGAGGGAAACTAGTTGAGGAGTTGGTGAAGGAGCCATTAGGGTACGTGGTCGAGGATGTTCACGAGTTTTTGTCGGTGGCCACCACGGAGGAGCATTTCTTAGGACTAATTGATTGGATGGAGGCTCAGAGGCCGATTCCTGGAGTGTCAAGAATTTATTGTAATCGTGCCGACGAGGGACCAGCCTTTGTGGTGTCGTCCGGTCAAAGGTTTCCAAAGGAGAAGGTGGATTTTGGGTGGGGGAAAGCAATTTTTGCATCGTACCATTTTCCTTGGGGCGGCGAAGCTGGTTATGTTATGCCAATGCCAAGTCCTTTGGAGAATGGTGATTGGGTTGTGTACATGTACCTTGCAAAGAAGCACTTGGACATCATAGAGACTGAAGCTGCTCATGTGTTTAAGCCCTTGACTTGGGATTACCTTAACAAATAA 1422 0.4655 MCSENGDFSVQVTNEEVVAAVLPMQEHWLPLSNLDLLLPPLDVGVFFCYKNPIITSKPMEDSATNKISFGTMVGSLKKALAQTLISYYVFAGEVMLNSMGEPEVLCNNRGVDFVEAQADVELKNLNFYNPDQSIEGKFVPKKKNGVLVVQTTALKCGGIIVACTFDHRISDAYSTNMFLVSWAAMAHPTITILSTTSCHPCFRRSLLNPRRPGSIHPSLNQMYTSISHLPLPPPPTTTATATALLSRIYFVTAEQLHHMQSLAVTRTKLECFSAFLWKMVACAASRDTNSKRATVKMGIVIDGRKRLGNGDKESEAMMKCYFGNVLSIPFGGKLVEELVKEPLGYVVEDVHEFLSVATTEEHFLGLIDWMEAQRPIPGVSRIYCNRADEGPAFVVSSGQRFPKEKVDFGWGKAIFASYHFPWGGEAGYVMPMPSPLENGDWVVYMYLAKKHLDIIETEAAHVFKPLTWDYLNK 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00242 473 Gene3D - 7 222 IPR023213 -
Vian6g00242 473 Gene3D - 230 457 IPR023213 -
Vian6g00242 473 Pfam Transferase family 9 460 - -
Vian6g00242 473 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 22 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00242 Vian-Chr6 7500392 7504305 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00242 32 456 Monolignol Biosynthesis Gene Families AT5G48930 24.318 1.41e-29 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00242 - - gmx:100785067 724.161