Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00241 ATGTGTTCTGAAAATGGAGATTTTTCTGTGCATGTGACGAATGAAGAGGTGGTGGCAGCAGTGTTACCAATGCAGGAACATTGGCTTCCACTCTCTAACCTTGACCTGCTTCTACCTCCATTGGATGTAGGAGTATTCTTTTGCTACAAGAACCCTATTATCACATCCACAACCATGGAAGATAGTGCCACCAACAAAATCAGCTTTGGAACCATGGTGGAGTCTTTGAAGAAGGCCTTGGCTCAAACCCTAATCTCTTATTATGTCTTTGCAGGTGAAGTCATGCTCAACAGCATGGGTGAACCTGAAGTTCTCTGCAACAATCGTGGTGTTCATTTTGTTGAAGCTCAGGCAGATGTTGAACTCAAGAACCTCAACTTTTACAACCCAGACCAATCTATTGAAGGCAAGTTTGTTCCAAAGAAGAAAAATGGTGTGCTTGTTGTACAGGCAACATCACTAAAGTGCGGTGGAATAGTTGTAGCATGTTCATTTGATCATCGCATTGCAGATGGGTATTCAGCAAACATGTTTCTGACTTCATGGGCCGACACGGCCCATCCCACCAAGGCCACAACTAAGAGCCCATGTTTCCGTCGGTCCCTCCTCACTCCTCGTCGTCCATGTTCTGTTCCAACTTCCCTTCACCAAATGTACACCCCTAATTCGAAGTTCACCCCATCTCAAACCGTAACCGCCCCTCTCTTGAGTCGCATATACTACGTAACTGCTGAGAAACTTCACAGCATGCAAGCCCTTGCGAGTGGCAATGGCGGAAAACGTACGAAGCTGGAGTGTTTTTGTGCGTTGTTGTGGAAGATGGTTGCACGTGCGGCTTCAAGAGAGGGGAGCGGCAAAAGGATGGTGGCGAAAGTGGGAGTCGTGGTTGATGGAAGGAGAAGACTGTGGAAAAGTGAGAAAGTGAAGGAAGCGTTGATGGGGAATTACTTCGGGAACGTGCTTTCGATACCCTTTGGAGAGAAGGTGGTGGAGGAGTTGATGGAGAAGCCATTAGGGTTTGTGGCTGATGCGGTTCACGAGTTCTTGGCGGAGGCGACGACGGAGGAGCATTTCTTGGGGCTGGTTGATTGGGTGGAGGGTCATAGACCAGAGGGAGGGTTGGCAAGGATTTACTGTGATGGAAGTGAAGGAGGGAGCTTTGTGGTGTCTTGTGGGCAAAGGTTTTTGGAGGGGAAGATGGATTTTGGGTGGGGGAAGGTTGTGTTTGGGTCATTCCATTTTCCTTGGGGTGGTGAAGCTGGTTATGTGATGCCAATGAAGAGCCCTCTAGGGAATGGTGATTGGGTTGTGTACGTGCATCTTACCAAGGACCAATTGGAAGTCATAGAATGTGAGGCTGGTGATGTTTTTAGACCCATCACTTGGGATTACCTTAACCCTAACTTCATATTCTAG 1416 0.4781 MCSENGDFSVHVTNEEVVAAVLPMQEHWLPLSNLDLLLPPLDVGVFFCYKNPIITSTTMEDSATNKISFGTMVESLKKALAQTLISYYVFAGEVMLNSMGEPEVLCNNRGVHFVEAQADVELKNLNFYNPDQSIEGKFVPKKKNGVLVVQATSLKCGGIVVACSFDHRIADGYSANMFLTSWADTAHPTKATTKSPCFRRSLLTPRRPCSVPTSLHQMYTPNSKFTPSQTVTAPLLSRIYYVTAEKLHSMQALASGNGGKRTKLECFCALLWKMVARAASREGSGKRMVAKVGVVVDGRRRLWKSEKVKEALMGNYFGNVLSIPFGEKVVEELMEKPLGFVADAVHEFLAEATTEEHFLGLVDWVEGHRPEGGLARIYCDGSEGGSFVVSCGQRFLEGKMDFGWGKVVFGSFHFPWGGEAGYVMPMKSPLGNGDWVVYVHLTKDQLEVIECEAGDVFRPITWDYLNPNFIF 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00241 471 Pfam Transferase family 9 452 - -
Vian6g00241 471 Gene3D - 219 451 IPR023213 -
Vian6g00241 471 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 22 427 - -
Vian6g00241 471 Gene3D - 7 218 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00241 Vian-Chr6 7302049 7304468 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00241 32 450 Monolignol Biosynthesis Gene Families AT5G48930 25.227 1.54e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00241 - - gmx:100777149 702.205