Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00232 ATGTTGATGGCTTTAAGGGAGAACACAAACAGCCCGAATATCTCAAGTTGCAGGTTCTTTTTCTTTCTTTCTTTATGGAATTTTAGGCACTCTATATGTGAGATCTCATTGCTTGTTGGTTCTTGTTTGCAGCCCTTTGGACTGATGCCTGTTGTTGAAGATGGGGATTATGTTCTTTATGAATCACGGGCAATACTGAGGTATTATGCAGAAAAGTACAAAAATCAAGGGACGAATTTGTTGGGAAAGACAATGGAAGAGAGAGGGCTTGTGGAACAATGGCTTGAAGTTGAAGGGCATAACTATACTCCACCGATCTACAACTTGATCAAAATGTACTTTGCTTCTGTACTAAGTGGTGAAGCAATGGACCCAAAGGCCATTAAAGAGAATGAGAAAAAGCTCGGAAAAGTGCTTGACATTTATGAAAAGAGGCTATCCGAGACAAAGTACTTAGCAGGGGATTTCTTCAGTCTTGCTGATCTTAACCATCTTCAATTTACTTCTTATTTGGTGAATGAAATGGAAAGAGGGTTTATGGTTAGAGAAAGGAAGAATGTGAGTCGTTGGTGGGATGATATTAGCAGCAGACCCTCTTGGAAGAAGGTTCTTCACTCCTACAAAAATGCTTATGATGGGCTTAAGGAGATGAACGTAATAGCGCCTTAG 669 0.4006 MLMALRENTNSPNISSCRFFFFLSLWNFRHSICEISLLVGSCLQPFGLMPVVEDGDYVLYESRAILRYYAEKYKNQGTNLLGKTMEERGLVEQWLEVEGHNYTPPIYNLIKMYFASVLSGEAMDPKAIKENEKKLGKVLDIYEKRLSETKYLAGDFFSLADLNHLQFTSYLVNEMERGFMVRERKNVSRWWDDISSRPSWKKVLHSYKNAYDGLKEMNVIAP 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00232 222 Pfam Glutathione S-transferase, N-terminal domain 44 70 IPR004045 -
Vian6g00232 222 Gene3D Glutaredoxin 22 81 - -
Vian6g00232 222 PANTHER GLUTATHIONE S-TRANSFERASE RHO 43 206 - -
Vian6g00232 222 CDD GST_C_Phi 86 204 IPR034347 -
Vian6g00232 222 SFLD Glutathione Transferase (cytosolic) 43 197 IPR040079 -
Vian6g00232 222 Pfam Glutathione S-transferase, C-terminal domain 122 198 IPR004046 -
Vian6g00232 222 SFLD Main (cytGST) 43 197 - -
Vian6g00232 222 SUPERFAMILY Thioredoxin-like 43 74 IPR036249 -
Vian6g00232 222 SUPERFAMILY GST C-terminal domain-like 74 208 IPR036282 -
Vian6g00232 222 FunFam Glutathione S-transferase F2 82 204 - -
Vian6g00232 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 77 IPR004045 -
Vian6g00232 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 84 219 IPR010987 -
Vian6g00232 222 Gene3D - 82 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00232 Vian-Chr6 6797166 6797903 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00232 42 207 Glutathione S-transferase Gene Family AT2G30870 56.024 6.27e-65 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00232 K00799 - gmx:100809406 272.707