Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00176 ATGGTGTCGTCCATGGAGTTGCTAAGGCTTGCAAATTGGGTCATGAACCAGGTGCTTGTTAAATCATGTTATGGAGTAGCAAGGAAAATTAAAAGCCATGGTTTTGATTGGGGTGATCTTTCATATAAACCATTGCAACAACCTTCCTCGTTCTCTGATATTGTCAAGTGTGATTTGGAGGGTAGAGGGTCTCAAACCCTTGCTTGTGACTTCCACAAAGTCCTCTTAAGGACTCGTTCCTTCTTTCCCTATTTCATGCTGGTTGCCTTTGAAGGTGGAAGCATCTTCAGGGCATTTCTCTTGCTTTGTTCATGTCCTATACTGTGGTTTCTGAACTATGAAATGAAGCTCAGACTCATGATCTTCATCTCCTTTTGCGGACTCAAAGTGAAGGACATGGAGAACACTTCAAGGGCAGTGTTACCAAAGTTTTACTTGGAGAACCTTAATCTTGAGGCCTATGAGGTAGTTGCTTCAGTAGGGTCCAGGGTTTTCTTCACCACTATGCCTAGAGTGATGGTGGAAGGGTTTCTGAAGGAGTATTTGAATGCTGATGCTGTTATAGCCACAGAGTTGCATACTTCTGGTTCTTATTTCACTGGTTTTCTCTCTAAGTCTGGTTTTCTTGTGAAACACAGTGCCCTTAAGGATTATTTTGGCGATACAAAACCTGACCTTGGCATTGGTAACACAAGCCTTCATGATCAACTTTTTATTTCTCTTTGCAAGGTATCTCCTGAACCTAGTTACTTCTTAAGGATATACTATGCTTTTGATTATGTGTTTGTTCAAGGATTAAATTCTAGATTCGAAGAGGCTTATGTGGTGATGAATGAGGGAAAAGTGATGCCAAGGAACAAGTATCCAAAGCCCTTAGTATTTCATGATGGAAGACTTGCATTCTTGCCTACTCCTTCAGCAACTCTGTGTATGTTCATGTGGCTTCCAATTGGACTTGTGATGGCCATTTACAGAATATTTCTGGGTGTGTTCCTTTGTTGCAAATTCACAATGGCATTAGGAGTGTGGTGTGGGTTGAAACTGGATTTCAAAGACAATAACCAGAAAAAATCAGAGTCAGATAAAGGGGTGCTTTATGTTTGCACTCACAGGACTCTCTTGGATCCAATTTTTCTGAGCTCAGGTTTGGGGAGGCCTTTGACAGCAGTGACATATAGCTTAAGCAAGGTGTCTGAGTGTATAGCCCCTATTAGGACCATAAGACTGACAAGGGACAGAAAAGAAGATGGAGAAACTATGAAAAGGTTGCTTGGTGAAGGGGATTTGGTGGTGTTTCCTGAAGGAACAACTTGTAGGGAGCCCTATCTTTTAAGGTTCAGTTCCTTGTTTGCAGAACTGGCTGATGAGATTGTGCCTGTGGCTGTGAATGTTCATCTGAGCATGTTCTATGGGACCACAGCAAGTGGCCTGAAGGTGTTGGATCCATTTTTCTTTTTCATGAACCCTAGCCCTAAATATGACATTGAGATCCTTGAAAAGGTTCCTAAAGAACTCACTTGTGCTGGGGGAAGGTCAAGTCATGAAGTGGCAAATCACATACAGAAACAGTTGGGCTATGCTTTGGGATTTGAGTGCACCAACCTTACAAGGAGGGATAAATATATAATGCTGGCTGGAAACGAAGGGGTTGTTCAAGAAAACAAGGGGAGAAGATTCTGA 1680 0.4214 MVSSMELLRLANWVMNQVLVKSCYGVARKIKSHGFDWGDLSYKPLQQPSSFSDIVKCDLEGRGSQTLACDFHKVLLRTRSFFPYFMLVAFEGGSIFRAFLLLCSCPILWFLNYEMKLRLMIFISFCGLKVKDMENTSRAVLPKFYLENLNLEAYEVVASVGSRVFFTTMPRVMVEGFLKEYLNADAVIATELHTSGSYFTGFLSKSGFLVKHSALKDYFGDTKPDLGIGNTSLHDQLFISLCKVSPEPSYFLRIYYAFDYVFVQGLNSRFEEAYVVMNEGKVMPRNKYPKPLVFHDGRLAFLPTPSATLCMFMWLPIGLVMAIYRIFLGVFLCCKFTMALGVWCGLKLDFKDNNQKKSESDKGVLYVCTHRTLLDPIFLSSGLGRPLTAVTYSLSKVSECIAPIRTIRLTRDRKEDGETMKRLLGEGDLVVFPEGTTCREPYLLRFSSLFAELADEIVPVAVNVHLSMFYGTTASGLKVLDPFFFFMNPSPKYDIEILEKVPKELTCAGGRSSHEVANHIQKQLGYALGFECTNLTRRDKYIMLAGNEGVVQENKGRRF 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00176 559 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 285 552 - -
Vian6g00176 559 SMART plsc_2 364 465 IPR002123 GO:0016746
Vian6g00176 559 PANTHER ANCIENT UBIQUITOUS PROTEIN 65 555 - -
Vian6g00176 559 Pfam Acyltransferase 353 457 IPR002123 GO:0016746
Vian6g00176 559 CDD LPLAT 348 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00176 Vian-Chr6 4768295 4771162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00176 1 552 Acyl Lipid Metabolism Gene Families AT1G06520 51.809 0.0 578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00176 6 4768295 4771162 Vian7g01178 7 20088353 20090717 PCT
Vian7g01255 7 20712768 20714790 Vian6g00176 6 4768295 4771162 PCT