Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00135 ATGATTTCTTCCTTGAGACAGCCTGTTGTGGGGATCAGTGGTTCTGATCTTCTTTTGAGGCAAAGACATGCAACCCCGGTTAAGGCACGGTCGTTTTTGCCTTGTTTGGCAAGGGAAAAGGGACAGGGATCTCTGGTTTCGGTGCATAAGCCACTGCACATTGCTTCTTCTCTTGGTGGTCGAAATTTTTCTTCAGTGAAGAGTGGTGGAAAGGGTGATTTGGTGAAGTGTGAGGCCTATGAGGCAGACAGATCAGAGGTTGAGGCTACAAACACACCATCAGAGGCTTCAAAGAAGGTGAAGATTGGCATATATTTTGCAACCTGGTGGGCTCTGAATGTGGTGTTTAATATTTATAACAAGAAGGTGTTGAATGCCTACCCCTTCCCGTGGCTGACTTCAACTCTCTCACTTGCATGTGGGTCTCTCATGATGTTGATCTCTTGGGCCACTGGGATTGCAGAAGCCCCCAAGACTGATCCTGAGTTTTGGAAGTCTTTGTTCCCTGTTGCCGTTGCACATACAATAGGACATGTGGCAGCAACTGTTAGTATGTCAAAAGTTGCGGTATCATTTACACATATAATCAAGAGTGGTGAGCCTGCTTTTAGTGTTCTGGTTTCAAGATTTCTCTTGGGTGAGACTTTCCCCGTGCCAGTCTATCTGTCTTTACTTCCGATCATTGGTGGATGTGCACTTGCAGCCGTGACTGAACTCAATTTCAACATGATTGGTTTCATGGGTGCTATGATATCGAATTTGGCATTTGTATTCCGTAATATCTTTTCAAAAAAGGGAATGAAGGGAAAGTCTGTCAGTGGAATGAATTACTATGCTTGTTTATCTATTTTGTCCCTTGCAATTCTCACACCCTTTGCAATTGCCGTGGAAGGACCACAGATGTGGATTGCGGGATGGAAAACATCGATCTCTCAGATTGGAAACCAACTCATATGGTGGGTAGCAGCTCAAAGTGTATTCTATCACTTATACAATCAAGTGTCATACATGTCTCTAGATGAGATCTCTCCCTTGACATTTAGCATTGGAAACACCATGAAACGTATATCTGTCATAGTGTCTTCGATTATTATCTTCCACACTCCAGTTCAACCTGTTAATGCTCTTGGTGCCGCTATTGCTATCCTTGGAACCTTCTTATATTCACAGACTTACCAAAGTTGTCCACGCCATATACTTTTGCACATGCTTTTTGGTTCATACCTTCACAATGAGGCTTCTAATGAAAGCATCTTTGGCATGTTCCTTGAAAATGTCAGGCAAAACAATAGATTTGGTGGACTAAGATTCCTCTATGGATTTGTTTGTTACCGTTCTTCATGCTCAACCAGGGGCAAGAAAGTTAAATTTGGAATGTGTCACTGCTGGATTTTTGCAAGACTAGGATGCTCTGGCTGTCAGTCCATCTGTAGATAG 1437 0.4308 MISSLRQPVVGISGSDLLLRQRHATPVKARSFLPCLAREKGQGSLVSVHKPLHIASSLGGRNFSSVKSGGKGDLVKCEAYEADRSEVEATNTPSEASKKVKIGIYFATWWALNVVFNIYNKKVLNAYPFPWLTSTLSLACGSLMMLISWATGIAEAPKTDPEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLAILTPFAIAVEGPQMWIAGWKTSISQIGNQLIWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFLYSQTYQSCPRHILLHMLFGSYLHNEASNESIFGMFLENVRQNNRFGGLRFLYGFVCYRSSCSTRGKKVKFGMCHCWIFARLGCSGCQSICR 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00135 478 Pfam Triose-phosphate Transporter family 101 389 IPR004853 -
Vian6g00135 478 SUPERFAMILY Multidrug resistance efflux transporter EmrE 144 236 - -
Vian6g00135 478 PANTHER SOLUTE CARRIER FAMILY 35 101 391 - -
Vian6g00135 478 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 101 394 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00135 Vian-Chr6 3611693 3615395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00135 39 390 Antiporters AT5G54800 79.944 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00135 K15283 - gmx:100801832 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00135 6 3611693 3615395 Vian7g01229 7 20492557 20495858 PCT