Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00063 ATGAATACGAAAATGCAGAAAGAAAAGCCGGAGCTGTTGCCTTCATCCGGAGACGATGACGACATCATTCTCAGTCAGCAACTGTTTTGTAACATCGACAAGGTGGAGGAAGATAGCCCTTGCCCCAAGTCACCAGAGAAGCCGTATGCTACGAAAACCAAGAGATGCCGAATGGATGATGGTGATACTCTCAGATTTACCGATGATGAACCAGTTGTGGAACTTGGCAGTGACCATAATGAGCCATTTGTGGGATTAGAGAATCATTTTTTTCGAGAAGAAGATTATTATAATAAGCTGAGGACTCGAAGACATGTGTCGAGTTCTGCAATTGCACTACGGTGCAGTACTCCTCTTTGTATTAGAAACTCCTTTTTGAAAAGCAATTCGGAGGAGGAAGAGGACATTTTTAGAAGCCAAACACTAAAATTTGATGACCTCATCCCTTCCGTTATTGGTTGTAATGATCGGTCACGCTATCTCTATGACTTTCGTCGGATTAAGAAAATTGGTAAGGGAAACTTAAACGAAGTTTTTAAAGTATTGAAGCGATTAGATGGCTGCATGTATGCTGTGAAATGTACCATCAAGCGGTTGCGTACGGAACCAGAAAGGCTTAAAGCTTTTAAAGAAGCTCAATCTTTGGCTGCCATAGGTTTCCATCAGAATATAGTGAGATATTATTCTTCGTGGATTGAGGATGAACAAATGTATACTCAGATGGAGTTTTGTGATCACAACTTATCTAGTGAAAATTGTCCAACATTGCTTACCGAACGACATGAAATGGATGTTTTATATCAGGTTTCTAGTGCACTGCAATTTATACATGAAAAGGGAATAGCTCATCTTCATGTCAAGCCAGAAAATATTTACGTCAAAGATGGTATTTATAAGCTTGGTGGTTTTGGATGTGCGACTCTATTAGACAATAGCTTGCTTGTTGAAGAGGGTGATGCACGGTACATGCCGCTGGAGATTCTCAATAAGAATTATGATCACCTAGATAAGGCAGATATCTTCTCCCTAGGAGCTTCCATGTTTGACATAATTCGAAGGTCACATTTGCCAAAAGCAGAAACTGAGTTCTCTAAACTTAAAGAGGGAAAGGTGCCACACTTGCCTGGAGTTACAATCCAGTTTCAAAACTTGCTCCAGGTCATGATGGACCCTGATCCTCTTAAGCGTCCTTCCGCCACTGAGATATTGGGAAATTCAATATTCAGAGGGTCCCTTAAAATGACATAA 1248 0.4062 MNTKMQKEKPELLPSSGDDDDIILSQQLFCNIDKVEEDSPCPKSPEKPYATKTKRCRMDDGDTLRFTDDEPVVELGSDHNEPFVGLENHFFREEDYYNKLRTRRHVSSSAIALRCSTPLCIRNSFLKSNSEEEEDIFRSQTLKFDDLIPSVIGCNDRSRYLYDFRRIKKIGKGNLNEVFKVLKRLDGCMYAVKCTIKRLRTEPERLKAFKEAQSLAAIGFHQNIVRYYSSWIEDEQMYTQMEFCDHNLSSENCPTLLTERHEMDVLYQVSSALQFIHEKGIAHLHVKPENIYVKDGIYKLGGFGCATLLDNSLLVEEGDARYMPLEILNKNYDHLDKADIFSLGASMFDIIRRSHLPKAETEFSKLKEGKVPHLPGVTIQFQNLLQVMMDPDPLKRPSATEILGNSIFRGSLKMT 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00063 415 MobiDBLite consensus disorder prediction 1 20 - -
Vian6g00063 415 Pfam Protein kinase domain 165 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian6g00063 415 Gene3D Phosphorylase Kinase; domain 1 153 243 - -
Vian6g00063 415 FunFam Wee1-like protein kinase 243 412 - -
Vian6g00063 415 Gene3D Transferase(Phosphotransferase) domain 1 244 411 - -
Vian6g00063 415 SUPERFAMILY Protein kinase-like (PK-like) 158 410 IPR011009 -
Vian6g00063 415 MobiDBLite consensus disorder prediction 1 16 - -
Vian6g00063 415 ProSiteProfiles Protein kinase domain profile. 164 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian6g00063 415 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 101 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00063 Vian-Chr6 2030680 2034029 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00063 21 408 Core Cell Cycle Gene Families AT1G02970 45.366 5.11e-119 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Vian6g00063 Pkinase 5.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00063 K06632 - gmx:100784055 461.07