Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00044 ATGGATCACTCCTCCATCCTTTTATTGTCCCACCTTCAATTTCAAAACTTGTGGTCATCTTTGATCATTCTTGTAATTTTCTGCATAACCTTTCTCAAAGGCCTTGGATTTCACTTGTTGAAGAAATCCAAGAATGAAGAAATACCCTTACCACCTGGTCCCAAACCATGGCCTATCATCGGCAACCTTCCTGAAATGCTTGCAACTAGGCCTACATTCAGGTGGATAAACAACCTAATGAAGGGAATGAAAACTGAGATTGCTTGCATTCGCCTGGGCAATGTTCATGTTATCCCAGTAACTTGTCCCATCATTGCTCGTGAATTCTTGAGGAAACAAGATGCTACTTTTGCTTCTAGACCCACAAGCATAACCACTTCTCTTATCAGTCGTGGTTATCTCACCACAGCCGTTGTGCCCTTAAGGGAACAATGGAAGAAAATGAGAAGAATTGTTGGCAATGAGCTGTTGTCCACCACCATTCACCACCAGCTTCAACACAAGAGGCTTGAAGAAGCCAACAACCTTGTCTTTTACATCTACAATAAGTGCAAAAAAAACGTCAACGTTAATGTTGGTTTTGTGAATGTGAGGGATGTCGCGCAACACTATTCCTGCAACGTGATCAAGAATTTGAGCTTTGGTATGAGGTATTTTGGGGAGGGTAAGAATGATGGAGGGCCTGGTTGTGAGGAAGTGGAACATCTTGAAGCCATTTTTGTATTGCTAAAGTACATTTATGACTTCAGTGTTTCTGATTATGTTCCTTGCTTGAGAGGACTTGATTTGGACGGCCACGAGAACAAGGTGAAGAAGGCAATACAAATCGTGGACAAGTATCACAATCCCATCATTGATCAACGAATCAGAGAATGGAATGATGGATCCAAGATTCATAAAGAAGATTTCCTTGATATTCTCATCTCACTCAGAGACGCCAACAATAATCCAGTATTGACAACACAAGAAATCAAGGCACAAATAATGGAATTGATGATGGCTGCTGTGGATAACCCATCAAATGCAGTTGAGTGGGGTCTGGCAGAGATGATAAACCAGCCTGACACAGGAAGACGTGGTTGTCCTGGAATCATGCTTGGAACAACAATGACTGTGATGCTGTTTGCTAGGTTGCTTCATTCCTTTAGTTGGACTGTGCCGCCCAATGCCTCACGCATCAACCTTGCAGAGAGCCACCACGATATACTTCTGGCTAACCCACTTGTGGCAGCGGTGTTCATCCCAATTGTAAGTGATGGTCATTGGTGGTGTTATGCACTGAAGGTCTGCACTTTTCAGTTTTATGTCATAGACACACTGGCCAATGGTATCAAAGGACGTTGTCAGATTGATAGAAGCATTGCTGAAAATATTCAACGGTTTTGGGGTTTGTTGACGGATAAACTTGAAGTTTCCAAGTGTCCTTTGTTAGTTGAGAAAGCCAACATCCTAGTTCAACCAAACACATACGATTGTGGTGTAATCATGATGAAAGCTATTGAAATTTGGGATGGGGAGGAGAAATATGATGGGAAAAGCATGCCTGATTATACAAATGAAGACTTGGCTCCGTTTAGGAAAAAGTGTATATGTGATTGGATCCTGGACGAGGACAACGTCCGAAGATTGGACACGCTGCAACATTTCGGATTACTATAG 1659 0.4237 MDHSSILLLSHLQFQNLWSSLIILVIFCITFLKGLGFHLLKKSKNEEIPLPPGPKPWPIIGNLPEMLATRPTFRWINNLMKGMKTEIACIRLGNVHVIPVTCPIIAREFLRKQDATFASRPTSITTSLISRGYLTTAVVPLREQWKKMRRIVGNELLSTTIHHQLQHKRLEEANNLVFYIYNKCKKNVNVNVGFVNVRDVAQHYSCNVIKNLSFGMRYFGEGKNDGGPGCEEVEHLEAIFVLLKYIYDFSVSDYVPCLRGLDLDGHENKVKKAIQIVDKYHNPIIDQRIREWNDGSKIHKEDFLDILISLRDANNNPVLTTQEIKAQIMELMMAAVDNPSNAVEWGLAEMINQPDTGRRGCPGIMLGTTMTVMLFARLLHSFSWTVPPNASRINLAESHHDILLANPLVAAVFIPIVSDGHWWCYALKVCTFQFYVIDTLANGIKGRCQIDRSIAENIQRFWGLLTDKLEVSKCPLLVEKANILVQPNTYDCGVIMMKAIEIWDGEEKYDGKSMPDYTNEDLAPFRKKCICDWILDEDNVRRLDTLQHFGLL 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00044 552 Pfam Cytochrome P450 51 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00044 552 SUPERFAMILY Cytochrome P450 49 390 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00044 552 Pfam Ulp1 protease family, C-terminal catalytic domain 410 504 IPR003653 GO:0006508|GO:0008234
Vian6g00044 552 SUPERFAMILY Cysteine proteinases 411 528 IPR038765 -
Vian6g00044 552 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 356 398 - -
Vian6g00044 552 Gene3D Cytochrome P450 37 356 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00044 552 Gene3D Adenoviral Proteinase; Chain A 383 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00044 Vian-Chr6 1487043 1493162 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00044 356 410 Cytochrome P450 AT5G05260 45.455 1.62e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00044 - K14984 vra:106779949 628.632