Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00032 ATGACCATCTACATCAAGACCTTGGAAGACAGGTATGTTGATTCTTGCAGGAGACAGGGTGTTTTGCCTAATTATTTTATTTGGGCAAGTCTTTTCAAGGCTGAGGTTAAAAAGTTCAATCATAAACTGTGCAAGCTGGAGATTTTAATTGATGACCTAAAAGATGTTGATATTGCTCGACTTCTTGACTTGTGCATGAACTTTTATGCTTCTGAAATAGAAGTTGTTGATGTACGTAATGAATCATCATGTGTGTTAAATGGAGAACATGCATTGTCACTGATATGTGCTGTTAATAAAAAGCTTCGAGTAGCCCATCTGCAGGATATGTTACATGGGAAGGACTTCTTACGAGATATTTCACAGAGTTTTGGCATGCCAAGTTTTGACATTGAGTGGCGCACTACATCTCTGCTCACTCGCTTCTTAAATCTAGGAAAATTCCAGTTCCTGGTCAGAATCAAAATGCCCTTTCTTAGAGGTTTTAGATTTAATCTCTTTTTGGTGTATCTCTTTGCTACTTGGGTTCAACTCCAAACCAAGGTGGAAAGTGACCAATACAAAGTTGGAGATCTAGATTCCTGGGGGATCCCCACTTCATCAAATTCACGAGTCTATGACAAATGGTCCAAATATCACAACCTCAAGATCGGTGATTCCCTCTTGTTTCTGTACCCACCAAGCCAAGATTCATTGATTCAAGTGACAGAGGAGTCCTACAACAGCTGCAACCTTAAAGATCCAATCTTGTACATGAACAATGGGAACTCGTTGTTCAACATTACATCAGTAGGGGAGTTTTACTTCACCAGTGCAGAGTTTGGTCATTGCCAAAAGCATCAAAAGCTTCACATAACTGTGGGAGTTGGAGGAAACACCGACACACTTTCTCCGTCTTCACTGCCTCAATCCGCAACTTCTTACCCAACTGCTTTTGGCGACATTCCCATGTCTCCTTCTAGTACCTCTTCACCTCACCCAAATTTAAATTTTTCACTCATAGTTATTGGGTTCTTCCTATGTGCTCTCTTCCCGAGCCTATTAAGATAA 1050 0.4057 MTIYIKTLEDRYVDSCRRQGVLPNYFIWASLFKAEVKKFNHKLCKLEILIDDLKDVDIARLLDLCMNFYASEIEVVDVRNESSCVLNGEHALSLICAVNKKLRVAHLQDMLHGKDFLRDISQSFGMPSFDIEWRTTSLLTRFLNLGKFQFLVRIKMPFLRGFRFNLFLVYLFATWVQLQTKVESDQYKVGDLDSWGIPTSSNSRVYDKWSKYHNLKIGDSLLFLYPPSQDSLIQVTEESYNSCNLKDPILYMNNGNSLFNITSVGEFYFTSAEFGHCQKHQKLHITVGVGGNTDTLSPSSLPQSATSYPTAFGDIPMSPSSTSSPHPNLNFSLIVIGFFLCALFPSLLR 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00032 349 Gene3D - 184 297 IPR008972 -
Vian6g00032 349 SUPERFAMILY Cupredoxins 185 287 IPR008972 -
Vian6g00032 349 Pfam Plastocyanin-like domain 204 280 IPR003245 GO:0009055
Vian6g00032 349 ProSiteProfiles Phytocyanin domain profile. 185 289 IPR003245 GO:0009055
Vian6g00032 349 FunFam Early nodulin-like protein 1 184 292 - -
Vian6g00032 349 PANTHER BNAC09G30780D PROTEIN 2 127 IPR046377 GO:0071493|GO:0080008
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00032 Vian-Chr6 1098599 1109340 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00032 181 317 Phytocyanin Superfamily AT1G64640 62.319 1.84e-53 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00032 - - var:108342497 392.119