Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01862 ATGTCGTCCAACCCTTCCCCGCCGCCGCACTCTTCGCACAAACCCGGTCAAGACCATCCTGCCCCTGGAAAACCGTCATCGCCAGCCGGAAGAGCTAAGCTCCTGAAGATCCCGCCCATTCCTATTCGACGGAGTAATTTAGGCAATGAAGAGGAGAAAGAAGAGGAAGATGAATGCTCTGAATCTTCTTCCATCTTGCTGGCGTCCTCTTTAGGGCTCAATAACATTCGAACGCGTTCTTCCGCGTCGCCTCTTCGCTATTCCTCCTCCGTTGGCGCTCCTTCCTTTCTCACACAGAATGCTGCTGTCACCATCAATGACGCCAGATTTAGAACAAGATTGAATTCCCATCCACAAAGAGACCACCTAGGGGAAAAAGTTCATTTGAATCAATCCAGATCGCTCAGAGCTCATTCGCAACTCATTCCTGTGCTAGAGGGTCATCATGGAGCTTTCGCCAAAGAAATGCAATCCCCACGTTTTCAGGAAATCCTGCGACTTACTAGTGGACGCAAAAAGAGAAATCCTGATATCAAAAGCTTTTCCCATGAACTCAACTCCAAGGGAGTCAGACCATTTCCAATCTGGAAACATCGTGCCTTTGGCCACATGGAGGAAGTCATGGGGGCGATTAGAGCTAAGTTTGAGAAATTAAAGGAAGAAGTTGATTCTGACTTGGGTGGTTTCGCTGGAGATTTGGTGGGCATTCTTGAAAAAAACTTAGTGTGTGATCGTGAATGGAGAGAGAGGCTCGAGGATCTGTTGATTGTTGCTCAACAATGTGCAAAGATGTCTCCTACCCAGTTTTGGATCAAATGCGAATCTATAGTTCAAAATCTAGATGACAAACGTCAAGAATTGCCAGTGGGGATACTCAAGCAAGCTCATACACGTCTACTGTTTATTCTCTCTCGTTGCACTCGATTAGTGCAATTTCAGAAGGAAAGCGGAATTGAACAAGACCACATTCTGGGTCTTCACCAACTCAGCGACCTTGGGGTCTATTCTGAGCAAATTTTGAAGGCTGCACAGCAAAATTCTAGTATTCCACCTGCTGGACACGAGACCGCTGACAAACAGTTAAAAATGTCACGTAGTAAAGAGAAAGACAAACCGATAACAACACAGGGTAAAGCTGACCAACAAGTAAGTGTGGCGATTGACAACCCGGAGGTTAGTACAACCAAGAGTGTTGAATCAACTTCTGGCAGCTATAGGATGTCTTCTTGGAGAAAGTTTCCAACTGCTGAGAAAAGGCGAAAAGATCAAGATGCTGCAGATACCCCATCCAAAGGTGAAATGGACCACTTGTTAATAAATGCTGAAAATTTGGATAATTCCTCTTGTCATCCTGAACATTCACAATCATCATCAAGAACGCGAAAGGTTTCTTGGGGATTCTGGGGAGACCACCATACTCTTACATACGGGGATTCAATGATATGCAGGATTTGTGAGGTTGAAATACCGATTGTACATGTGGAGGAGCATTCAAGAATATGCACAATTGCGGATAGATGTGATTTGAAAGGTTTAACTGTAAACGAACGGCTTGAAAGAGTTTCTGAAACCATTGAAAGGATAATGGATTTCTGGACACCAAAAAGCACACCCAAAAGCACTGATACTCCTGGAGAAAGCTTTGACCTTGCCGCTTCAAATGTGCTTGAAGAGTTCAATGATTTATCTCTAGAGAGAAATAACCTGACACTTAGATGCTCTGAAGACATGCTCGACTCTACAGATCTTGACAATACTTTTCTCATGGACGATCTGAACCTTTCACCCAGAACATCATGCGAGGCTCGCATCTGTGTAAAACCTGATCACGGAACAAAGGTATCTTCAGCTGGGAGCTTGACACCGAGATCACCATTGGTAACACCACGAACCACTCAGGTGGAACTGTTACTAAGTGGACGGAGAACATTGTCTGAACTTGAAAGTTGTGAACAGATAAGCAAGCTAGTTGAAATAGCCCGTGCTGTCGCAAATGTGAACAACTGTGACTACAGTGCTCTGGAGTATATGCTTGATCGCTTAGAAGACCTGAAATATGCCATTCAAGACAGAAAAGTGGATGCCCTTATTGTGGAGACTTTTGGACGACGAATAGAGAAACTTTTGCAGGAGAAATATATATCCCTTTGCGGGAAGATAGAAGATGAAAAGGTGGACTCATCAACTAGCGTAGCTGATGAAGAGAGTTCAGTGGAAGATGATGCAGTTCGTAGCCTTCGTGCTAGCCCTATTAATACTTGTTCCAAGGACCGAACCTCTATTGAAGACTTTGAAATAATAAAACCCATAAGTAGGGGTGCATTTGGACGCGTTTTTCTTACCCGAAAAAGAGCAACCGGTGATTTATTTGCTATAAAGGTTCTGAAAAAGGCCGATATGATCCGTAAAAATGCAGTTCAAAGTATTTTGGCTGAGAGAGACATACTTATATCAGTTCGAAATCCTTTTGTGGTTCGATTTTTCTACTCTTTCACATGTCGGGAAAATCTTTATCTAGTTATGGAGTATTTGAATGGTGGAGATCTTTATTCGATGTTGAGAAATCTAGGGTGCTTAGATGAAAACATGACTCGAGTTTATATAGCAGAAGTTGTAAGGATACTAACTGCATTAGTTTTCACCAGGAGTTCTCTCTGCAATTGTGTTTCAGTTCTTTATCCTTTTCCCTCTATCTTCTTGGTCGCTCTACAGGTTCTTGCATTGGAGTATTTGCATTCCTTAAATGTAATTCACAGAGACCTGAAGCCAGATAACTTACTGATTGGTCAAGATGGCCATATTAAGTTAACAGATTTCGGGCTCTCCAAGGTTGGCCTTATCAACAGCACAGATGATTTATCAGCGCCATCGTTTTCGGCCATCCTAGAAGACGACGATATGCCAAAACCTAGACATTCTTCAAAACGGGAAGACCGTCAAAGACAATCAGTAGTTGGCACTCCGGATTACCTGGCACCTGAAATACTTCTTGGCATGGGACATGGTTTGCAGTTTATCCGCTGA 3024 0.4335 MSSNPSPPPHSSHKPGQDHPAPGKPSSPAGRAKLLKIPPIPIRRSNLGNEEEKEEEDECSESSSILLASSLGLNNIRTRSSASPLRYSSSVGAPSFLTQNAAVTINDARFRTRLNSHPQRDHLGEKVHLNQSRSLRAHSQLIPVLEGHHGAFAKEMQSPRFQEILRLTSGRKKRNPDIKSFSHELNSKGVRPFPIWKHRAFGHMEEVMGAIRAKFEKLKEEVDSDLGGFAGDLVGILEKNLVCDREWRERLEDLLIVAQQCAKMSPTQFWIKCESIVQNLDDKRQELPVGILKQAHTRLLFILSRCTRLVQFQKESGIEQDHILGLHQLSDLGVYSEQILKAAQQNSSIPPAGHETADKQLKMSRSKEKDKPITTQGKADQQVSVAIDNPEVSTTKSVESTSGSYRMSSWRKFPTAEKRRKDQDAADTPSKGEMDHLLINAENLDNSSCHPEHSQSSSRTRKVSWGFWGDHHTLTYGDSMICRICEVEIPIVHVEEHSRICTIADRCDLKGLTVNERLERVSETIERIMDFWTPKSTPKSTDTPGESFDLAASNVLEEFNDLSLERNNLTLRCSEDMLDSTDLDNTFLMDDLNLSPRTSCEARICVKPDHGTKVSSAGSLTPRSPLVTPRTTQVELLLSGRRTLSELESCEQISKLVEIARAVANVNNCDYSALEYMLDRLEDLKYAIQDRKVDALIVETFGRRIEKLLQEKYISLCGKIEDEKVDSSTSVADEESSVEDDAVRSLRASPINTCSKDRTSIEDFEIIKPISRGAFGRVFLTRKRATGDLFAIKVLKKADMIRKNAVQSILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSMLRNLGCLDENMTRVYIAEVVRILTALVFTRSSLCNCVSVLYPFPSIFLVALQVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLINSTDDLSAPSFSAILEDDDMPKPRHSSKREDRQRQSVVGTPDYLAPEILLGMGHGLQFIR 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01862 1007 Gene3D Transferase(Phosphotransferase) domain 1 887 1004 - -
Vian5g01862 1007 MobiDBLite consensus disorder prediction 1 15 - -
Vian5g01862 1007 Gene3D Phosphorylase Kinase; domain 1 704 886 - -
Vian5g01862 1007 ProSiteProfiles Protein kinase domain profile. 764 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian5g01862 1007 MobiDBLite consensus disorder prediction 412 431 - -
Vian5g01862 1007 MobiDBLite consensus disorder prediction 963 983 - -
Vian5g01862 1007 SUPERFAMILY Protein kinase-like (PK-like) 748 1002 IPR011009 -
Vian5g01862 1007 FunFam probable serine/threonine protein kinase IREH1 762 852 - -
Vian5g01862 1007 CDD STKc_MAST_like 770 1002 - -
Vian5g01862 1007 MobiDBLite consensus disorder prediction 344 432 - -
Vian5g01862 1007 PANTHER SERINE/THREONINE-PROTEIN KINASE 445 1002 - -
Vian5g01862 1007 MobiDBLite consensus disorder prediction 964 983 - -
Vian5g01862 1007 MobiDBLite consensus disorder prediction 1 62 - -
Vian5g01862 1007 ProSitePatterns Serine/Threonine protein kinases active-site signature. 916 928 IPR008271 GO:0004672|GO:0006468
Vian5g01862 1007 MobiDBLite consensus disorder prediction 358 375 - -
Vian5g01862 1007 MobiDBLite consensus disorder prediction 376 409 - -
Vian5g01862 1007 SMART serkin_6 764 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian5g01862 1007 Pfam Protein tyrosine and serine/threonine kinase 765 944 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01862 Vian-Chr5 40707350 40713264 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01862 32 1002 AGC Kinase Gene Family AT5G62310 57.400 0.0 1063
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Vian5g01862 PK_Tyr_Ser-Thr 2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01862 - - gmx:100817975 1541.94