Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01859 ATGGCACTCTTTAGAACACTCCTATCAGTTGTTTTCCTCTCAACCTTTCTCCGATCAGCAGCATCAACAAACACCACCGATTCCCTCAAACCCTACAAAAAGTTCATAAAAGATCAGTGCAATTCAACCACTAACGCAGCACTTTGCTACAACTCTCTCTCACCGTACGCATCGAAGATCAAAAGAAACCGCCTAACGCTCACGAAACTCTCCATTCATGTGGCTCTAAAAGCAGCCAAGAGTGCGAATAGCACGTTGACGAGGTTGTCGAAGGTGAAGCTATCACATGGAGAAAGCTCCGTCATTGCTGACTGCAGAGAGAACATTGCGGACACGTTGGATCTGCTTCAGCAATCTGCACAAGCGTTGGCACATTTGAACGGTGCCTCTACTGCTGATGAGAGGTTTCAATGGGACAGCATCAAGACCTGGCTCAGTGCTTCCATAACAGATGAATCTACTTGCATCGATGAGTTTGATGAAATAAAAGTGCGTTCTTCGCTGCGGAACATGATCAAAACCACCGTTTTTAACGTTTCTTCCTTGATTAGCAATGCTTTGGCACTAGTCAACAGGCTTTTCTAG 585 0.4547 MALFRTLLSVVFLSTFLRSAASTNTTDSLKPYKKFIKDQCNSTTNAALCYNSLSPYASKIKRNRLTLTKLSIHVALKAAKSANSTLTRLSKVKLSHGESSVIADCRENIADTLDLLQQSAQALAHLNGASTADERFQWDSIKTWLSASITDESTCIDEFDEIKVRSSLRNMIKTTVFNVSSLISNALALVNRLF 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01859 194 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 193 IPR035513 -
Vian5g01859 194 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 189 - -
Vian5g01859 194 Pfam Plant invertase/pectin methylesterase inhibitor 34 189 IPR006501 GO:0004857
Vian5g01859 194 CDD PMEI-like_3 40 193 - -
Vian5g01859 194 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 193 IPR035513 -
Vian5g01859 194 NCBIfam pectinesterase inhibitor domain 8 193 IPR006501 GO:0004857
Vian5g01859 194 SMART PMEI_2 31 189 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01859 Vian-Chr5 40692021 40692605 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01859 36 193 Carbohydrate Esterase AT1G53830 25.625 5.46e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01859 - - vum:124840556 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01859 5 40692021 40692605 Vian5g01859 5 40692021 40692605 ECH