Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01781 ATGGCAGACAGTGTAATTACCTTTGTTTTAGATCACTTGGCCCAGCTTTCCGCACGCGAAGCTAACTTGCTGTATGGTGTGGAGGATAGAGTCCAGTTCCTCAAGTCGGAACTCGAAATGATCAAAGAGCTCCTCGATACCACAACGCGCAAGAAGGGAATGGAACATATAGTATTGAACCAAATCAAAGATGTTGCCCACTTAGCTGAGGATGTCATCGACACATTCGTAGCCAAAGTTTCCATTCACAAGAGGAGAACCATTCTGGGGAGGATGCTCTGTGGCTTTGGCCAAGTAAGGTTGCTCCACCACGTAGCCCACAAAATAGACAAGCTCAAAACCACTCTCAACGAGATACGCGACAACAAGGACAAATATGATGCTTTCAGAGAAACCACTAATCAATCTGCAGCAGAAGAGGAGGAGGAGAAGGAAAGGTTGCAATCGCTGCACAAGCTAAGAAGAGACGTGGAGGAAGAACATGTTGTTGGCTTTGTCCAGGACTCCAAGGAGCTCGTCAAGCAACTCCTGGAAGGTGGTTCAAATCGTAAAGTTGTTTCTATCGTTGGCATGGGGGGATTGGGGAAGACCACCCTTGCCCGAAAGGTCTACAGTAGCGGCGAGGTGAAGAACCACTTTGATTGTCGTGCGTGGGTTTATGTCTCAAACGAGGGCAGAGTCAGGGAGCTTTTGCATGACCTTCTTAAGCATTTGATGCAAAATTTTGAACAACAACGCAGAGGCCACAAGAAAGATAAGAAAAGGGCCGAAAACGTTAACAGCCTGAGTGAGGAGGAGCTGAAGAAACGGGTGTGGAAATGCTTGGAGAGGGAAAGGTATCTTGTGGTGATAGATGACTTGTGGAAAAGGCAGGATTGGGATGAGGTGCAAGATGCTTTTCCAGACAACAACAGAGGTAGCAGAATATTGATCACTAGTCGTTTGACAGAAGTGGCCAAGCATGCTGGCCATGATGTTCCTCACAATCTTCCATTCCTGAGTCAAGAAGAAAGTTGGGAGTTGTTTTGCAGGAAAGTGTTTAGGGGTGAAAACTGTCCTTCTGATTTGGAGACCCTGGGAAAGCAGATGGTTCAAAGTTGTCATGGTTTGCCACTCTCCATCATGGTTTTAGCAGGGCTGCTAGCCAACAAGGAAAAGTCATCTGAAGAATGGTCTAAAGTGGTAGGTCATGTTAATTGGTATATCACTCGAGATGAGACCCAAGTGAATGATATAGTTCTCAAGCTCAGCTACGACAACTTACCGAGGAGACTAAAATCATGTTTTCTCTATCTTGGTTTATTTCCGCAAGACTTTGAAATACATGTTACTCCATTATTGCAAAAATGGGTTGCGGAGGGTTTCATACAAGATACAGGAAATAGAGACCCATATGATGTTGCGGAAGACTACTTGTATGAGCTCATCGATCGTAGTTTGGTCCAAATAACAAGAGTGAAATTTAATCGAGGTTTGGATAGGTGTCAGGTTCATGATCTTCTTCGAGATCTTTGCATGCAAAAGAGTAAAGAAGACAAAGTTTTCGAAGTTTGCACAGACAATAACATTGTAATCCCTACTAAACCTCGCAGACTGTCGATTCACAGTGACATGGGTCACTACATTTCTTCAAGCAACAACGACCATTCATGTATTCGTTCCCTGTTTTTCTTTGGGCCACACTATGATGTTCATGGGAAGGAGTGGAAATGGCTTTTGGACGACTTCAAATTGGTTCGAGTGTTAGATTTTGGACCTAACAGTTACCAAAAGATTCCTTCCAGTTTAGGGAACTTCATCCACTTAAGGTACTTGAGAATACACTCAAAGCTGATTTCATTTGTTCCCGATTCAATACTTAACCTTTGGAATCTGCAAACCATAGACCTGGGTTTTTCGACGGATATCATTATAGTTTCTTTCCCTATTCAAATGTGGAAACTCAAGTATTTAAGGCATTTGAACACACAAGGACCTATCAAGTTACGAGGAACATGTTCACAATCAGATGAGAAGATGTGGAATCTTCAAACCATCTCTCCCCTTATACTCAATAAACAAGCAACATCGCTAATAACGAAAGGAACATTCCCCAATATTAAGAGGATGGGGCTTGTGGAGACTCATGATTATGAAGGTAAATTACTCAATTTATTGCAGAACTTGCAACAATTAAAGCATTTAAATAAATTAGTGATTGTGCCCCAACTTTGGCTTAGTTGCAAGCCGAAAGAACTGGTTCAAAGTCTAGGAAAATTAAGTTGTCTAACTATTTTAATGATTGATAATGTTGTGGACCTTCTAACCTCTGAGCTCATTTTCCCTCCAAACATTATAGAGTTAATGTTGTCAGGGATTAAGTGGATTACCAACGAGGGGATGAATAGTCTGGGAAATCACTCCAAACTCAAAATTTTGAAACTTTTGGGAGATATAACTTGGTCTGGGGATTCCATTGACCTCAATTGTGTTGATGACAGCTTCCCACAACTGGAAATATTTCGAATGAGTCATTTGGCAGTTAGAAAGTGGGAATTAGGCAATGGTGCAATGCAGAGGCTTCAAAATGTGCTTATTGACAATTGCAAAGAATTAGATAATCTTCCAAGTGAACTCTGTTCTTTGAATGGATTGAGAAAAATGCATATAACGGAATCTCCTTCAGAACAAATGGCTCACATCTTACAAATTTTGAAAACAAATAATGGAGTTCAAGTCGTTACTGGGACTAATCAATCTCCAGATTATGATATTTTTGATATTTTCTAG 2769 0.4146 MADSVITFVLDHLAQLSAREANLLYGVEDRVQFLKSELEMIKELLDTTTRKKGMEHIVLNQIKDVAHLAEDVIDTFVAKVSIHKRRTILGRMLCGFGQVRLLHHVAHKIDKLKTTLNEIRDNKDKYDAFRETTNQSAAEEEEEKERLQSLHKLRRDVEEEHVVGFVQDSKELVKQLLEGGSNRKVVSIVGMGGLGKTTLARKVYSSGEVKNHFDCRAWVYVSNEGRVRELLHDLLKHLMQNFEQQRRGHKKDKKRAENVNSLSEEELKKRVWKCLERERYLVVIDDLWKRQDWDEVQDAFPDNNRGSRILITSRLTEVAKHAGHDVPHNLPFLSQEESWELFCRKVFRGENCPSDLETLGKQMVQSCHGLPLSIMVLAGLLANKEKSSEEWSKVVGHVNWYITRDETQVNDIVLKLSYDNLPRRLKSCFLYLGLFPQDFEIHVTPLLQKWVAEGFIQDTGNRDPYDVAEDYLYELIDRSLVQITRVKFNRGLDRCQVHDLLRDLCMQKSKEDKVFEVCTDNNIVIPTKPRRLSIHSDMGHYISSSNNDHSCIRSLFFFGPHYDVHGKEWKWLLDDFKLVRVLDFGPNSYQKIPSSLGNFIHLRYLRIHSKLISFVPDSILNLWNLQTIDLGFSTDIIIVSFPIQMWKLKYLRHLNTQGPIKLRGTCSQSDEKMWNLQTISPLILNKQATSLITKGTFPNIKRMGLVETHDYEGKLLNLLQNLQQLKHLNKLVIVPQLWLSCKPKELVQSLGKLSCLTILMIDNVVDLLTSELIFPPNIIELMLSGIKWITNEGMNSLGNHSKLKILKLLGDITWSGDSIDLNCVDDSFPQLEIFRMSHLAVRKWELGNGAMQRLQNVLIDNCKELDNLPSELCSLNGLRKMHITESPSEQMAHILQILKTNNGVQVVTGTNQSPDYDIFDIF 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01781 922 CDD RX-CC_like 2 121 IPR038005 -
Vian5g01781 922 SUPERFAMILY L domain-like 496 890 - -
Vian5g01781 922 FunFam Probable disease resistance protein At1g63360 418 507 - -
Vian5g01781 922 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 432 IPR027417 -
Vian5g01781 922 Gene3D - 5 96 - -
Vian5g01781 922 PRINTS Disease resistance protein signature 274 288 - -
Vian5g01781 922 PRINTS Disease resistance protein signature 367 381 - -
Vian5g01781 922 PRINTS Disease resistance protein signature 185 200 - -
Vian5g01781 922 PRINTS Disease resistance protein signature 620 636 - -
Vian5g01781 922 Pfam NB-ARC domain 170 420 IPR002182 GO:0043531
Vian5g01781 922 Coils Coil 239 259 - -
Vian5g01781 922 Gene3D - 148 326 IPR027417 -
Vian5g01781 922 PANTHER DISEASE RESISTANCE PROTEIN RP 31 851 IPR044974 GO:0006952
Vian5g01781 922 Gene3D - 418 509 IPR036388 -
Vian5g01781 922 FunFam Probable disease resistance protein At5g66910 332 419 - -
Vian5g01781 922 Pfam Rx N-terminal domain 5 85 IPR041118 -
Vian5g01781 922 Coils Coil 31 51 - -
Vian5g01781 922 Gene3D Ribonuclease Inhibitor 516 910 IPR032675 -
Vian5g01781 922 Coils Coil 130 160 - -
Vian5g01781 922 FunFam Probable disease resistance protein At1g61300 144 327 - -
Vian5g01781 922 Gene3D - 332 417 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01781 Vian-Chr5 40062587 40065355 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01781 184 507 WRKY Transcription Factor Family AT5G45050 25.076 2.16e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01781 - - vra:106779070 1367.83