Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01752 ATGGCTCCTTCTGGCTGTGTTACCGATTCGATTCATCCGTCAACAGCGCCGGAAGTTGAAGAGAAGGATCTTCGGTTGATTATATTTGCTTCTGATTTTATATCTCGCGAGAATGATAACGTCGCTGTGCGTCTTTTGTTTTCGCACTTTCAATTCCTGACTAGAACACCAACTGCACAGGCAAAGTTGTGCAAGACAAATGAATTATCTTCATCACCAGAGAGTGTAAAGAAGTTGGGAGGAAGTATGACGGAGGGATGTGATCTCCATTTGTTTCAGCAACTACAAATTGAAGCTTTTGACATTGTTTGGGAAAAGATCGAATCTACCATTAAGGGTGTTTTAAGAGATCTCAATGCCAATGTATTTAATAGTATACAACAATGGGTTCTGGAGTGCTTCAACACTACTAAGTTGCTTGGACAACATACCATTGCTGAAGCAACTCGGTCTTTTCCTGTTCTAAATAATACCACTCATGGGCAGCTGTTCACTGCTTTTATTGTCACCAGAAACATAGAGTTCGTTGATGATATGTTGACATTTGAAGAGCTTGGCCATTTCTTGAAATCCCATGGATGCCATGTGGCTAAGCTTTCATCCCTAGAGTTTTCATTGAAAAATGGGATTGCTGGTTGCTTGAAAGCTCTGTTGCGAGAGTTTGTTGGATGTGTTATTGATGTGGGTGCTTCTGTCAGTTCTTCAGCTGATATATCAATCTTAGCATCATGGTATAGAGAACATGTAAACTACAATAAACCACTGGTGCTGATCATTAATGATTTGGGGAGATGTTCTGGATCAGTCTTAACTGATTTTATCTTGATGCTGAGTGAATGGATTGTCAAGGTGCCAATTATCTTCATATTTGGAGTTGCAACGATAGTGGATACCCCGAGAAACATTCTGCCATCACATGCTCTTGAGCGTTTGTGTCCCTCTAGTTTTATGCTTGGAACACCTGCCGAGAGAATGGATGCAGTTGTTGAGGCTGTTCTTGTGAAACATTGTACCATGTTTAGTATTGGTCATAAAGTGGCAGTCTTCCTGAGGAACTACTTCATCAACCAGGATGGGACAATAACATCCTTTATTAGAGCTTTGAAGGTAGCTTGCCTATTGCATTTCTCAATGGAACCTCTAAGTCTCATACATGGGCGAGCACTGGCTGAAGATCAGAAGGAGGGTAAATCTGCAGTATCACCTGAGACACTGCTGAAATACATAGATGAACTTCCATTGTATGCAAGGAATCAAATTGCTGATCATCACACCAAAAAGAGCACTGCTGAGGCTTTGTCAGAATTGGTGACAATGCAGAAACTATGGAGTACTGCAGTTCTGTGCCTATATGAAGCTGGAAAATATAGCAGAGTGCGACTATTGGATTTGTTTTGTGAAGCTCTAAGTCAAGATAAGTACCTGTCAACGGGTCCTGATTGTTGTGTGGGAAATGAAAGAAATTGTGGTTTGGATCTCCCCGCAGTGATGCTATATCAGTTAATTGAGAATTGGGAAAAACTTACTGCAGATATTTCAGAGGTGATGAAATTGCTTTTGCTCAAGATTCACGAGAAACTGAAAGTGTTGCAATCTTCATTAAGATGTGAAGATGGAAAGAGTCCACGCAAGAGTTCCAAGGACAATCCCAAGAGATATGCGTCCAGGATTTCAGTAAACACTGATAAGGACGCGAGAATGCTAAATTCACAAGCTATTGCATTTTTAAACTGTTTAGTTGGGAATTTTTTGAAGCCCATTGAAGGCATGCCTTTCCACGAAATTTTATGTTTCAAGAATGTTGGGAAGCTTCAATTGGTTTTGATTGGAGATCCAAGAAGAAGAATTCAGGTTGATCTGTTGGAGTTCCATAAGATTTTAAGGTGTAGCTGCTGTAGCAAGAATGGCAATGCCCTATTGCCATCCAGGCATGATTCCTCAATTATGTATTCTCTGGCTCAAGAGCATGGAGATCTTATCAATCTCCATGACTGGTTTCAGTCTTTTAGATCAATTGTTCTTCAAAATAAAAATAAACGGAAGCAAAGTGCAAAGCAATCCCCACAACCAAAGAAGAGAAAAGCTATAAATGGATCTGCAGACCAAAACGAAGCGTCAATTCAAGCACGCTTTTGTAAGGCAGTTACAGAGCTGCAGATCACAGGACTGGTTAGAATGCCCAGCAAGAGACGCCCAGATTTTGCGCAAAGAATAGCATTTGGACTTTGA 2229 0.4069 MAPSGCVTDSIHPSTAPEVEEKDLRLIIFASDFISRENDNVAVRLLFSHFQFLTRTPTAQAKLCKTNELSSSPESVKKLGGSMTEGCDLHLFQQLQIEAFDIVWEKIESTIKGVLRDLNANVFNSIQQWVLECFNTTKLLGQHTIAEATRSFPVLNNTTHGQLFTAFIVTRNIEFVDDMLTFEELGHFLKSHGCHVAKLSSLEFSLKNGIAGCLKALLREFVGCVIDVGASVSSSADISILASWYREHVNYNKPLVLIINDLGRCSGSVLTDFILMLSEWIVKVPIIFIFGVATIVDTPRNILPSHALERLCPSSFMLGTPAERMDAVVEAVLVKHCTMFSIGHKVAVFLRNYFINQDGTITSFIRALKVACLLHFSMEPLSLIHGRALAEDQKEGKSAVSPETLLKYIDELPLYARNQIADHHTKKSTAEALSELVTMQKLWSTAVLCLYEAGKYSRVRLLDLFCEALSQDKYLSTGPDCCVGNERNCGLDLPAVMLYQLIENWEKLTADISEVMKLLLLKIHEKLKVLQSSLRCEDGKSPRKSSKDNPKRYASRISVNTDKDARMLNSQAIAFLNCLVGNFLKPIEGMPFHEILCFKNVGKLQLVLIGDPRRRIQVDLLEFHKILRCSCCSKNGNALLPSRHDSSIMYSLAQEHGDLINLHDWFQSFRSIVLQNKNKRKQSAKQSPQPKKRKAINGSADQNEASIQARFCKAVTELQITGLVRMPSKRRPDFAQRIAFGL 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01752 742 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 93 383 IPR045667 -
Vian5g01752 742 MobiDBLite consensus disorder prediction 677 702 - -
Vian5g01752 742 CDD Orc3 98 740 - -
Vian5g01752 742 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 73 741 IPR020795 GO:0003677|GO:0005664|GO:0006260
Vian5g01752 742 MobiDBLite consensus disorder prediction 677 693 - -
Vian5g01752 742 Pfam Origin recognition complex winged helix C-terminal 613 740 IPR040855 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01752 1 674 Core DNA Replication Machinery Family AT5G16690 43.484 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01752 K02605 - gmx:100780646 1117.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01752 5 39821671 39830807 Vian5g01752 5 39821671 39830807 ECH