Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01748 ATGGTATCCCTCAAATCTGGAAACAAATTGGACAAATATTCTATGATTCTGAAAGCTGATATGAAACTCGAATCAGGGACTTGTAATGTTTGCTCAGTTCCTTGTTCATCTTGCATGCATCTTAACCGAGCTCTAATGGGGTCAAAGGCCAAAGAATTCTCTGATGAAAACTCTCGCTTAGGGGAGGGTAAGTATTGTGAGGATGATGGGTCTTCTCCTGGTAGCAGAGCTTGCGAAAGATTGAAGCATGCTGGCGATGACACCAATCACAAGCTTAGTATTTCTTCAACTCATGATTCTCGGTCTGAAAATGCTGAGAATGGACAAGCCTTATCTGAGAAGAATCAGGATTCCAAGTGTTTTGAAAGTCTTGACGATATCACTTCTAGTATCAGTAGGACCAGTAATGCTAATTTAGCGAGTGATAGGCACCAAATAAATACAGACAGCGTAAATGTATCTAGTAGTTCGACTTTAGTCAGTCACTTAGAGGCAGAAGGATCTGGACACGGGCCATCTGTTGACATGTCTGGTTTGTCAGAATGCTTTATGGAAAATGTAGATTCGTCATTTACCAAAGGGAGAGTACCTATTATTGCTGCTGATGCAAAACCTGTGGCAGATAAGGAAAACCTAAATAATAGTACAGCCAAAGTTTCAGTGGAAATATGTCCGAAGTCAGAAGCAGATATGGGAAATAATGTTGATGTTGCTAAAGATGAAGATCGTAAATATTCAGCCCATGATGGACTGCATGAGAAGGTCGATGAGCTGATTAAATCATCTGGCAGGTCTGAACCTCAATCAGAAGATGAGGGTGATGAATCAGATGTTGTTGAGCATGATGTAAAAGTATGTGACATCTGTGGAGATGCTGGTCGTGAGGATCTACTTGCCATATGTTGTAGGTGTAGTGATGGTGCAGAGCACACCTACTGCATGAGGGAAATGCTTGTCAAGCTCCCGGAAGGTGATTGGTTGTGTGAAGAATGCAAGTGTGCAGAGGAGACAACAAATCGAAGGCTCGTTGTCAAAGAAAAGAAAAAGCTTCATAAAGTTATTTCAGCTTCACAAATTTCTGGCAAAAGACCTTCTCAAAGCATGGAAATAGCTACAGCAGCTAAAAGGCAAGCTCTTGAATCGAGCACAGGATCACCAAAGGCATCAAGCCCAAAGAGAATAGTCTCACTCTCACGAGAATCTTCTCTCAAGAGCATGGATAAAGGAAAAATGAAGTCTGGGCAACAGATCCCCATGCGTAACCACCTTGGTGGCAATAATGTAGACCTTGCTCGGTCTCTTTCGACTGGCCCTCGGAGTCAAAATCCAAGGAGTACATTGTTGAAGTCCAATTCATTCAACAACTTCAATTCCAAGCCTAGAATCAAACTTGTCAATGAAGTTGTTCCCCAAAAGCAGAAAGGGGGTGTCGAACATATTTCTAAGAATATTGAGACACCTGCGGGGATGATGAGCAAATCAGTGTCATTCAAATCCTCACACTTGGGGCAGTCAAATACTAATGATTCAAAAGTTAAATCAAGTTTTTCTAAACCTGGAATTGTTCAGGATTTGAAACCACTGAGACATACAAAAGAATCGGGTTCACTTGACATGAAATTTCAACCTAAGATTGATCGACCTGTCATTTGTTCAACTACGGTTAGTTCTGTTGTTTCCACATCAAAAGGTGATCATAAGCTTGCTCCTCATGGTGAAACTGCTAAACCTTATACAGTTAACAACAATCGAGAGTTTAAGGTCAACCAAGATGGAAAAGTACATTCATTATCGAAGTCTATGAATAATACAGGCAGTAGAAGCCCAGAACCTCAAGTTAGTTCAGATAGAACATCAACCAGTGTTGATGAAACTCAACAGGATAGGATGCCTCGACCACAGGAGACTGTTAATCAGGTTGACAGAACCAAAGATAGTTCTAATGATCATGTGAGGTCAGGTGTTACTAATGCTTCAAAGAGTTCATTCTGTCGTAAATGTAAAGATTTTGGCCATGCTACAGAATGTTGCTCGAGTAGTGGTAAGCAGGAATTTGGTCCTGAAGCATCAGTCATTACTAGTTCAAAAAAGGATATGCATAAGGGAAATAGATTGAAAGCTGCAATCCAGGCAGCTTTGCGTAGAAGGCCTGAAATACATAAGAAGAAAGAAGGTCCTGATGAAACTAACGAGTTTCCTATATCAAGCAATGGTTTCAAACCTGAAGTCAATTCTCAAAGCCAAGTGTTGGTTTCCAACACAATGAAGAATAGTATATCTTCTGAAGAAACCCATGTGAAGCAGGAAATTCTTGAGAGTTCTTCATTTGAAACCTCTAAATATCCATCTGCTAATGGTCCGAAGCAACTTAAATTTTGCCAAACTGATCCTTGCTCTCAGCTGAGAAAGTCAGATTTTGCTGGTCTCACTTCTGGAAAGCCTGTAGTGAGAGACTTGCCCAATAATGGCATGGCGATTTCAAGTGTTCTTTCGAAGATGTCGATGATTCCGGAATATGAGTACATCTGGCAGGGTGTCTTTGAAGTGCGTAGAAATGGAAAGCCTCCAGACTTGTATGCTGGAATTCAGGCACATTTATCCGCATGTGCTTCTCCCAAAGTTATTGAGACAGTAAAGAATTTTTTACCTGAAGTTTCCCTAAATGAAGTTTCTCGATTGAGCATATGGCCTTCACAATTTCATCAAAGTGGTGCTAAAGAAGATAATATTGCTCTTTACTTCTTTGCCAAAGACATTGAAAGTTACGAGAGACACTACAAGGGTCTATTGGATCACATGGTTAGAAATGATTTGGCACTTAGGGGGACGTTTGATGGTGTTGAACTTCTCATATTTGCATCCAATCAGCTTCCGGAAGATTCACAACGTTGGAATATGTTATTTTTTCTATGGGGTATATTTAGAGGGAGGAGGATCAATCATTCAGATTCCACAAAAAGTGCATGTATTCCCAGTTTGAATGTGATGCCAAATGAGAAGGATCCATCTGTCATCATGACTTTGTCTGAAACTTGGTGTTCACCAAAACGCATAGATGAAGAGTCCATTGATCAAGGTCACAATAAGCCATGTAGGAATTTTGATAGTAAGGGAACTGTGTTTGGCCAGACACATTTGGAATTGCAAGTAAAGTTAGAGAGACAAGATTCTAGAGTCAACACCAAATCTACATCAGGGATTCAGATCACCGGTACCCAATCATTTCAAGAAATGAATTCCTCTGGTTCGTCCCTGGGAGATAGTGCACCAGATGATAGACGGTACATACAGTCTAAACCTCCCGAAGCAATGGGAACTAGTGTAAGTAGAAGGATTGTGGAAACAAAAACTAATCCTGATATTTCTGGTAAGCAAGAGACCTCTCTGTCTTCGGAGATCCGTTCTGTCGTTTGCCAAATAGATACTGCAAGTAATATCATTAAGGATAAAACTTTAGAGAGAACAAAATATGATGAGAATCAGCAAAGGCCTAAAAGGAAACAGTTGGAGAATGATCTCAATATTAATGAGGAGGCAACGTTTCAGGGAGAGCTGGATTTGGAAGGGGCCAACTTTCAGGTACCTACTGATAAAAAAATTAAGAATATAGATCTTTCAGATACAGTTGTGGAAACTTCTACAGTTAGTTATCGGAAACGGCCTTTGAATGAGGTAAATGGCAAATTGGAAGACAGAGAAAGTAGCAAGAAGCTGCAAACAAGTTTGGGTGGAGCTTTTGGATGTAACGATTCTGCTGGAGCCAGGGTCTCTTTCAGTGGTAGTTTCCCATCACTTGTGAACAATCTTGGTTCCTGTTCTTCAGGGGGCAAAGAAGCTTGCGATGAGAAAATCATCCACGAGGACCTAGGAACGATGGAAAGAACCTTTTTTCCTGTGGATACTCGTAATAAACTTAACTTGGGGATGGTGAACAGAGAGTCACTGAATGGGCCTCGTGAGTACGTGGACCAATTTGAAGTTGGGATTCCAAATTTGGAGCTTGCTTTGGGAGGTGAAACGAAACCGTCACACAAGGGTATGATGCCTTTCTTTGTTGGTACAGGTGACAAGAAAATCAACCCAGAAAAGACTCCAGATATCGAGCGAGACGATGACAACGTTGCTGCATCTCTTTCCTTGTCACTATCATTTCCATCATCAAGCAAAGAACACATCAAACCAGTTGCAAGAGATGAGCCTTTGCCTGATGCTAAATCACCGTTTCTTCTTTTTGGTAGATTCACGGACAAATAA 4254 0.409 MVSLKSGNKLDKYSMILKADMKLESGTCNVCSVPCSSCMHLNRALMGSKAKEFSDENSRLGEGKYCEDDGSSPGSRACERLKHAGDDTNHKLSISSTHDSRSENAENGQALSEKNQDSKCFESLDDITSSISRTSNANLASDRHQINTDSVNVSSSSTLVSHLEAEGSGHGPSVDMSGLSECFMENVDSSFTKGRVPIIAADAKPVADKENLNNSTAKVSVEICPKSEADMGNNVDVAKDEDRKYSAHDGLHEKVDELIKSSGRSEPQSEDEGDESDVVEHDVKVCDICGDAGREDLLAICCRCSDGAEHTYCMREMLVKLPEGDWLCEECKCAEETTNRRLVVKEKKKLHKVISASQISGKRPSQSMEIATAAKRQALESSTGSPKASSPKRIVSLSRESSLKSMDKGKMKSGQQIPMRNHLGGNNVDLARSLSTGPRSQNPRSTLLKSNSFNNFNSKPRIKLVNEVVPQKQKGGVEHISKNIETPAGMMSKSVSFKSSHLGQSNTNDSKVKSSFSKPGIVQDLKPLRHTKESGSLDMKFQPKIDRPVICSTTVSSVVSTSKGDHKLAPHGETAKPYTVNNNREFKVNQDGKVHSLSKSMNNTGSRSPEPQVSSDRTSTSVDETQQDRMPRPQETVNQVDRTKDSSNDHVRSGVTNASKSSFCRKCKDFGHATECCSSSGKQEFGPEASVITSSKKDMHKGNRLKAAIQAALRRRPEIHKKKEGPDETNEFPISSNGFKPEVNSQSQVLVSNTMKNSISSEETHVKQEILESSSFETSKYPSANGPKQLKFCQTDPCSQLRKSDFAGLTSGKPVVRDLPNNGMAISSVLSKMSMIPEYEYIWQGVFEVRRNGKPPDLYAGIQAHLSACASPKVIETVKNFLPEVSLNEVSRLSIWPSQFHQSGAKEDNIALYFFAKDIESYERHYKGLLDHMVRNDLALRGTFDGVELLIFASNQLPEDSQRWNMLFFLWGIFRGRRINHSDSTKSACIPSLNVMPNEKDPSVIMTLSETWCSPKRIDEESIDQGHNKPCRNFDSKGTVFGQTHLELQVKLERQDSRVNTKSTSGIQITGTQSFQEMNSSGSSLGDSAPDDRRYIQSKPPEAMGTSVSRRIVETKTNPDISGKQETSLSSEIRSVVCQIDTASNIIKDKTLERTKYDENQQRPKRKQLENDLNINEEATFQGELDLEGANFQVPTDKKIKNIDLSDTVVETSTVSYRKRPLNEVNGKLEDRESSKKLQTSLGGAFGCNDSAGARVSFSGSFPSLVNNLGSCSSGGKEACDEKIIHEDLGTMERTFFPVDTRNKLNLGMVNRESLNGPREYVDQFEVGIPNLELALGGETKPSHKGMMPFFVGTGDKKINPEKTPDIERDDDNVAASLSLSLSFPSSSKEHIKPVARDEPLPDAKSPFLLFGRFTDK 1417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01748 1417 MobiDBLite consensus disorder prediction 596 637 - -
Vian5g01748 1417 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 213 346 IPR013083 -
Vian5g01748 1417 MobiDBLite consensus disorder prediction 1059 1087 - -
Vian5g01748 1417 MobiDBLite consensus disorder prediction 596 657 - -
Vian5g01748 1417 MobiDBLite consensus disorder prediction 498 517 - -
Vian5g01748 1417 MobiDBLite consensus disorder prediction 358 402 - -
Vian5g01748 1417 MobiDBLite consensus disorder prediction 64 118 - -
Vian5g01748 1417 MobiDBLite consensus disorder prediction 562 583 - -
Vian5g01748 1417 PANTHER - 283 1009 - -
Vian5g01748 1417 SUPERFAMILY FYVE/PHD zinc finger 273 337 IPR011011 -
Vian5g01748 1417 MobiDBLite consensus disorder prediction 718 743 - -
Vian5g01748 1417 MobiDBLite consensus disorder prediction 73 97 - -
Vian5g01748 1417 MobiDBLite consensus disorder prediction 98 118 - -
Vian5g01748 1417 MobiDBLite consensus disorder prediction 259 278 - -
Vian5g01748 1417 MobiDBLite consensus disorder prediction 355 453 - -
Vian5g01748 1417 MobiDBLite consensus disorder prediction 428 453 - -
Vian5g01748 1417 MobiDBLite consensus disorder prediction 1054 1107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01748 Vian-Chr5 39777613 39785928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01748 178 370 C2H2 Transcription Factor Family AT3G01460 24.352 2.84e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01748 - - vun:114169861 2488.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01748 5 39777613 39785928 Vian10g00118 10 988732 995949 ECH
Vian5g01748 5 39777613 39785928 Vian5g01748 5 39777613 39785928 ECH