Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01733 ATGGCCACTGCTAATCCGACATGTCCACCACCAATGAAGGCCACCTCCAACGGTGCCTTCCAACATGAAAATCCATTGGATTATGCGCTTCCCCTTCTAATCCTTCAGATATGTCTCGTCGTTGTCTTCACAAGATTGCTTGCATTCATTCTCAAACCTCTCAGACAACCCAGAGTCATTGCAGAGGTTATTAAAAGCTTAACTGTGCTTGAAACTGTGGCCAATCTGGGTCTTCTGTTCTTCTTGTTTCTGGTGGGGCTTGAGCTTGACATGCGTTCGATACGCAGAACTGGTCACAAGGCCTTAGCCATTGCCGTTGCAGGCATCACATTGCCTTTTGTGCTCGGCATTGGCACCTCCTATGCTCTTCGAGCCACCGTATCCAAAAAGGCTAATCCAACCTCGTTCCTTATTTTCATGGGTGTTGCCCTCTCCATCACTGCTTTTCCCGTCCTTGCACGCATCCTTGCCGAGCTCAAACTCCTCACAACTGATGCTGGTCGCATAGCAATGGCAGCAGCTGCTGTGAATGATGTTGCAGCATGGATACTGCTCGCTCTTGCCATAGCTCTCTCTGGCTCTAACTCATCCCCTCTTGTTTCCTTGTGGGTCATACTCTGTGCTGCTGCTTTTGTCCTCTTGGCTATCTTTGCCTTAAATCCCTTGCTCACAATGATGGCCAAGCGTTCCCCTGAGGGTGAACCAGTGCAAGAGATTTACATATGCATCACCTTGACACTGGTCCTGGCTTGCAGTTTTATCACTGATACCATTGGCATTCATGCACTGTTTGGAGCTTTTGTGGTCGGCATAGTCATGCCAAAGGATGGTCCTTTTGCTGGGGTGTTGATCGAGAAGATAGAGGACCTTGTGATGAGTCTGTTGTTGCCACTCTATTTTGTCTCCAGTGGTTTGAAGACTGATGTGACAACCATTAGGGGAACACTTTCTTGGTGTATGCTGGTGCTTGTTATATTCACTGCTTGCTTTGGAAAGATCAGTGGCACATTCGTTGTGTCACTTCTATGTAAGGTTCCTTTTAGAGAAGCCTTGGCTCTTGGATTTCTCATGAACACCAAAGGCTTGGTGGAGCTCATTGTTCTCAACATTGGCAAGGATCGCAAGGTTCTGAATGATCAGACATTTGCAATCTGTGTATTGATGGCACTGTTCACCACTTTCATCACCACCCCAATAGTGATGGCAGTGTATAAACCAGCTCGAAGGGGATCACCATACACGCATAAAACAGTTCAACGCAAGGATCCAGACACAGAGCTAAGAGTGCTGGCATGCTTCCACAGTACCTACAACATTCCCACCTTGATCAATCTGATAGAGTCATCCCGGGGAACCAGAAAGCGTGGAAAGCTGTGCGTGTATTCCATGCACTTGATGGAACTCTCGGAGCGACCATCAGCCATCACAATGGTTCACACGGCACGCAACAACGGCATGCCCTTTTGGAACAAAAAGCACGATAACAAAGATCAAATGGTGGTTGCATTTCAGGGTTATGGCCGTCTAAGCAGCGTCAACGTTCGTCCCATGACAGCCATATCCGCCTTCAGCAGCATGCACGAAGACATCTGCACCAGTGCACACCAAAAGCGAGTGGCACTCATTCTCCTCCCTTTTCACAAACACCAACACTTTGATGGGACGATGGAGTCACTGGGAAACTCATTGCGTGCAATGAACGGCCATGTCCTCAGCCGTGCTCCTTGCTCTGTGGGAATTTTGGTTGATCGTGGACTTGGAGGTACAAGACAAGTCCAAGCCAGCGATGTGTCGTACGATGTTGTTGTAGGGTTCTTCGGAGGAAGAGATGATCGTGAAGCACTTGCATATGGAATGAGACTTGCCGAACATCCTGGTATCTCACTCACTGTAGTGAAGTTTGTGGCTGCACCTGGTCAAACATTCGCCTTTGGTGCAAAATTGATTGGTATAACAGCGAACAAGGACAGGAAGATAATAAACGTGGATCAGGGAACAGGTAATAGTGACGAAGATAAACAAGAGGATGAACAGTTTTGGTCGGAGTTCATGAGTGTGAGATCTAACAACACGGAATCGATTAAGTACGAGGAAAGATTGGTAGACAGCAAAGAAGATTTGAAAGCAGTGTTGAGGGAGAAGAATCGGAGCAATCTTATTTTGGTTGGTAGAATGCCGCAAGTGGCTCCTTTGGTAGAAAAAAGTGATTGTCCCGAACTTGGTCCCATTGGAAGCTATTTGGCTTCTTCTGAGTTTTCCACTTTGTCTTCAGTTTTAGTGTTGCAGCAATATAATCCTGAAACTGATGTTTATCCGATGGTTATGGAGGTTTCTGATTACATGGATGTGCCAGACACACCAACGGGTTTGAGTTTGTCCAGTTAA 2385 0.4696 MATANPTCPPPMKATSNGAFQHENPLDYALPLLILQICLVVVFTRLLAFILKPLRQPRVIAEVIKSLTVLETVANLGLLFFLFLVGLELDMRSIRRTGHKALAIAVAGITLPFVLGIGTSYALRATVSKKANPTSFLIFMGVALSITAFPVLARILAELKLLTTDAGRIAMAAAAVNDVAAWILLALAIALSGSNSSPLVSLWVILCAAAFVLLAIFALNPLLTMMAKRSPEGEPVQEIYICITLTLVLACSFITDTIGIHALFGAFVVGIVMPKDGPFAGVLIEKIEDLVMSLLLPLYFVSSGLKTDVTTIRGTLSWCMLVLVIFTACFGKISGTFVVSLLCKVPFREALALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAICVLMALFTTFITTPIVMAVYKPARRGSPYTHKTVQRKDPDTELRVLACFHSTYNIPTLINLIESSRGTRKRGKLCVYSMHLMELSERPSAITMVHTARNNGMPFWNKKHDNKDQMVVAFQGYGRLSSVNVRPMTAISAFSSMHEDICTSAHQKRVALILLPFHKHQHFDGTMESLGNSLRAMNGHVLSRAPCSVGILVDRGLGGTRQVQASDVSYDVVVGFFGGRDDREALAYGMRLAEHPGISLTVVKFVAAPGQTFAFGAKLIGITANKDRKIINVDQGTGNSDEDKQEDEQFWSEFMSVRSNNTESIKYEERLVDSKEDLKAVLREKNRSNLILVGRMPQVAPLVEKSDCPELGPIGSYLASSEFSTLSSVLVLQQYNPETDVYPMVMEVSDYMDVPDTPTGLSLSS 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01733 794 Gene3D - 32 411 IPR038770 -
Vian5g01733 794 FunFam Cation/H(+) antiporter 15 63 411 - -
Vian5g01733 794 PANTHER CATION/H + ANTIPORTER 7 765 - -
Vian5g01733 794 Pfam Sodium/hydrogen exchanger family 63 399 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01733 Vian-Chr5 39670329 39673143 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01733 1 780 Antiporter Super Family AT3G17630 66.708 0.0 1043
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01733 K26731 - gmx:100818975 1292.72