Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01695 ATGGAAGTTTCAGAAAAGAGAGGAATGTATCTTGTGTGGGAAGATTTAACCGTTGTGGTTCCAAATTTTGGAGATGGACACACTAAGAGATTGCTTAACGGATTGAGTGGATATGCTGAACCTAACAAAATCATGGCCATCATGGGTCCTTCTGGCTCTGGAAAATCTACTCTTCTTGATGCTTTAGCAGGAAGGCTCTCCAGAAACGTTATCATGTCTGGAAATGTGTTTCTAAATGGAAAGAAGAGGAGATTGGACTATGGCGGTGCTGCTTATGTGACCCAAGAAGAGACAATGCTGGGAACTCTGACAGTGAGAGAGACAATATATTACTTAGCTAATCTAAGGCTTCCAGGGAGCATGAGGAGAGAAGAGGTGAATGAGATAATAGAAGGAACGATTATGGAAATGGGTCTTCAAGAATGTGCAGATCGGATAATAGGGAATTGGCACTTGAGAGGTATAAGCGGTGGAGAAAAGAGAAGACTCAGCATTGCTCTTGAAATCCTCACAAGGCCAACTCTTTTGTTCCTTGATGAACCCACCACTGGTCTCGACAGTGCATCAGCATATTTTGTTGCTCAAACTCTCAGAAATTTGGCTCATGATTCAAAGACTGTTATCTCTTCTATACACCAACCAAGTAGTGAGGTTTTTGCACTCTTTGATCATCTCTTTCTTCTCTCTGGGGGTCAAACAATATACTTTGGACCTGCACAAAAGGCAACTCAGTTCTTCGCCAAAGCTGGATTCCCATGTCCAAGTAGAAGAAACCCTTCTGATCATTTCCTTCGTTGTATCAATTCAGACTTCGACGCTGTTACAACCAAAATCACGGCCTCCCAAACAAGACAAGAAGAAGTTTCATTATCAACTGCAGAAATCAAAGCAACACTCATAGAAAAATACCGATGGTCTGAGTATGCAACCACTTCAAGAGAAAGAATCAAGGAAATATCAAACATAGAAGGACATGATTTTGAAAGTGAAAGGAAATGCGAATCCAGATGGTGGAAGGAACTATCAGTGCTGACTCGGAGATCTTTCGTGAACATGTCAAGAGATTTGGGATACTACTGGATAAGGATAACCACCTATATCGCCTTATCTTTGTGCGTTGGAATAATCTTCCATGATGTTGGAACGAGTTACAGAGCCATTTTTGCGAGAGGATCATGTGCTGGTTTTCTCTCAGGTTTCATGACGTTCATGTCCATTGGGAGCTTCCCTTCTTTCTTAGAAGAAATGAAGGTCTTCTACAAAGAAAGAATGGGTGGTTATTATGGCGTTGGAGTCTACATTCTCTCAAATTTTCTGTCTTCCTTTCCGTTTTTGGCAGTGATGTCCACAGCTACGGGGGCTATAAGCTATTATATGGTTAAGTCTAGTTCAGAATTTTCACACTTTTTGTATATCACTCTTGATCTTCTGGGCTGCATTGCGGTTGTGGAGAGCTCCATGATGGTTATAGCTTCACTGGTTCCCAACTTCCTCATGGGATTGACGATTGGAGCGGGATATATTGGTCTTATGATGATGACTTCTGGCTTTTTCCGTCCGCTCCCTGATATTCCCAAATTCTTCTGGCGTTACCCAATATCATACATCAATTACGGCGCATGGGGATTAGAGGGGGCTTTCAAGAATGACTTGATTGGAATGGAGTTTGACCCCTTAGAACCTGGTGACCCAAAACTGAAAGGAGAATTTATTCTCAAAACCATGCTTGGAATTCAAGTTGATAATTCAAAGTGGTGGGACATAGCTGCAATCATGATCATCCTCATATTGCTTAGAGTTCTTTTCTTTTTCATTCTCAAATTCAAGGAGAGAGCTGCACCTTTTCTTTATAGCATCTACGCCAGGCAAACTCTGCAACGTATAAAGAAGCGACCTTCGTTCAGGAAAGCACCATCTTTTCCTTCCAAACGCCACCAATCACTGCATCCCTTGTCTCCTCAAGAGGATCTCAACTCGCTCATGCATTAG 1989 0.4203 MEVSEKRGMYLVWEDLTVVVPNFGDGHTKRLLNGLSGYAEPNKIMAIMGPSGSGKSTLLDALAGRLSRNVIMSGNVFLNGKKRRLDYGGAAYVTQEETMLGTLTVRETIYYLANLRLPGSMRREEVNEIIEGTIMEMGLQECADRIIGNWHLRGISGGEKRRLSIALEILTRPTLLFLDEPTTGLDSASAYFVAQTLRNLAHDSKTVISSIHQPSSEVFALFDHLFLLSGGQTIYFGPAQKATQFFAKAGFPCPSRRNPSDHFLRCINSDFDAVTTKITASQTRQEEVSLSTAEIKATLIEKYRWSEYATTSRERIKEISNIEGHDFESERKCESRWWKELSVLTRRSFVNMSRDLGYYWIRITTYIALSLCVGIIFHDVGTSYRAIFARGSCAGFLSGFMTFMSIGSFPSFLEEMKVFYKERMGGYYGVGVYILSNFLSSFPFLAVMSTATGAISYYMVKSSSEFSHFLYITLDLLGCIAVVESSMMVIASLVPNFLMGLTIGAGYIGLMMMTSGFFRPLPDIPKFFWRYPISYINYGAWGLEGAFKNDLIGMEFDPLEPGDPKLKGEFILKTMLGIQVDNSKWWDIAAIMIILILLRVLFFFILKFKERAAPFLYSIYARQTLQRIKKRPSFRKAPSFPSKRHQSLHPLSPQEDLNSLMH 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01695 662 Pfam ABC-2 type transporter 212 273 IPR043926 GO:0140359
Vian5g01695 662 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 6 631 - -
Vian5g01695 662 MobiDBLite consensus disorder prediction 645 662 - -
Vian5g01695 662 CDD ABCG_EPDR 8 237 - -
Vian5g01695 662 Gene3D - 2 250 IPR027417 -
Vian5g01695 662 Pfam ABC-2 type transporter 341 549 IPR013525 GO:0016020|GO:0140359
Vian5g01695 662 SMART AAA_5 41 231 IPR003593 GO:0016887
Vian5g01695 662 FunFam ABC transporter G family member 11 5 249 - -
Vian5g01695 662 Pfam ABC transporter 32 182 IPR003439 GO:0005524
Vian5g01695 662 ProSitePatterns ABC transporters family signature. 155 169 IPR017871 GO:0005524|GO:0016887
Vian5g01695 662 MobiDBLite consensus disorder prediction 632 662 - -
Vian5g01695 662 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 247 IPR027417 -
Vian5g01695 662 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 255 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01695 Vian-Chr5 39388703 39394504 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01695 30 226 Calmodulin-binding Proteins AT2G36910 28.241 8.14e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01695 K05681 - gmx:100806806 1110.13