Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01669 ATGGCATGGAAGTGGCAGAAAGAGGTTACAAAGTACCAAAGGAAGAGACTTGTCTGGCCAAAGACTGAAGAAAATGCAGCAACAGCAGAAGGTTGCAGCGTGTGGACGAAGGCTGAAAAGGGTCACTTTGTCGTATACAGCATGGATAAGAAGCGCTTCGTGCTTCCATTACTGTATTTGAAAAACAACATTTTCAGAGAGCTTTTCAAGTTGGCAGAAGAAGAGTTTGGTCTTTCCAGCAACGTGCCTTTAACGTTGCCTTGCGAAGCCACGTTAATGGAGTACGTGATAACGTTGATACAGAGAAACGTAACTAAGGATCTGGAAGAAGCTGTCTTGATGTTCATAGCTACCGTTCGATGCCAATCGTCCTTTGATCTTCTTCCTGAACCAACCAACCAACGTTTGCTTTGCAGCTACTGA 423 0.4444 MAWKWQKEVTKYQRKRLVWPKTEENAATAEGCSVWTKAEKGHFVVYSMDKKRFVLPLLYLKNNIFRELFKLAEEEFGLSSNVPLTLPCEATLMEYVITLIQRNVTKDLEEAVLMFIATVRCQSSFDLLPEPTNQRLLCSY 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01669 140 Pfam Auxin responsive protein 11 100 IPR003676 GO:0009733
Vian5g01669 140 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 123 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01669 Vian-Chr5 39111132 39111554 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01669 40 109 Calmodulin-binding Proteins AT5G20810 38.028 1.83e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01669 - - gmx:100803097 212.616