Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01662 ATGAACGACCAACTTTCAATGGCCGTTCATGGCGGTGACACAAAGTTTCACGACAAGTTTTCAGAGTCCAAATTTCTTACCTTTATCGGTGCCCATGAAATTTTCACAGTGGAGACGTGGAAAGCAGCTTTGGTAGAGTTAATTGCAACTGGTGCACTAATGTTCACCCTAACGAGTTGCACTGTTGCATGTTTGGAATCACACGAGTCCAATCCCAAGCTTCTTATTCCCTTTGCAGTGTTCATCATAGTGTTCTTGTTTTTAATTGTGATAGTTCCTCTATCCGGGGGTCATATGAACCCTATTTTCACATTCGTTGCGGCTCTAAAGGGTATTGTCACCCTTTCTCGTGCTCTCCTTTACGTCCTGGCACAGTGCATTGGCTCAATAATTGGATTCTTTGTACTCAAGAGTGTGATGGAGCCAAAATTAGCACAAACTTATTCTTTGGGAGGTTGTGCGATTGGTGACAAAGGACAAGGTTCTTCCATAAACCCGCAGGATGTTTTGTTGTTGGAATTCTCTTGCACACTTCTGGTACTCTTTGTCGGTATCACGCTGGCATTTGATAAGAAAAGGAGCAAGGAATTGGGCTTTCCAATGGTGTGTTTCGTGGTAGCAGCATCCCTCGCACTCGCAGTTTTTCTGTCGTTAACTGTAACAAGGAGGCCTGGTTATGCAGGTGCGGGCCTCAACCCGGCAAGATGTTTGGGCTCGGCGTTACTTCACGGAGGCTCACTATGGAATGGGCATTGGATTTTCTGGGTCGGGCCTTTCTTGGCCTGCATAATCTATTACAGTGTCTCCATTAGCCTACCAAAGAAGGGTTTGAATTGGGTGGATGGAGAATATGATATCTTCAACTTGGCTATGGATTTTTGTGGAACCATCCCTAACAATTCCGTTTTAAACGATCTTCCATGA 924 0.4481 MNDQLSMAVHGGDTKFHDKFSESKFLTFIGAHEIFTVETWKAALVELIATGALMFTLTSCTVACLESHESNPKLLIPFAVFIIVFLFLIVIVPLSGGHMNPIFTFVAALKGIVTLSRALLYVLAQCIGSIIGFFVLKSVMEPKLAQTYSLGGCAIGDKGQGSSINPQDVLLLEFSCTLLVLFVGITLAFDKKRSKELGFPMVCFVVAASLALAVFLSLTVTRRPGYAGAGLNPARCLGSALLHGGSLWNGHWIFWVGPFLACIIYYSVSISLPKKGLNWVDGEYDIFNLAMDFCGTIPNNSVLNDLP 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01662 307 SUPERFAMILY Aquaporin-like 37 264 IPR023271 -
Vian5g01662 307 Gene3D Glycerol uptake facilitator protein. 27 275 IPR023271 -
Vian5g01662 307 PRINTS Major intrinsic protein family signature 80 104 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vian5g01662 307 PRINTS Major intrinsic protein family signature 213 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vian5g01662 307 PRINTS Major intrinsic protein family signature 117 136 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vian5g01662 307 PRINTS Major intrinsic protein family signature 252 272 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vian5g01662 307 PRINTS Major intrinsic protein family signature 41 60 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vian5g01662 307 Pfam Major intrinsic protein 35 263 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vian5g01662 307 PANTHER AQUAPORIN-LIKE 17 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01662 Vian-Chr5 39056655 39057725 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01662 33 262 Major Intrinsic Protein MIP AT3G61430 29.046 4.28e-21 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01662 K09866 - gmx:100797262 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01662 5 39056655 39057725 Vian5g01662 5 39056655 39057725 ECH