Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01635 ATGACCAACACCACCCTCCAATATTACACTTCAAAACATACCAATACCATGCATTCCCACATTCCTTTCCATTACAACGCCATGACCAAACCAAGAACCCTCAACCTCACCTTCTTCATGCAAGACATCCAAATTTTTGAGATTTTCCTTGCGGTTCTTGTCTTCCTACTCATTCATTCTCTTAGACAAAAGAGGCTCCATGGCCTAGTCGTTTGGCCTGTCCTTGGAATGGTTCCATCTTTGGTCACAGGACTCAGAACAAACTTGTATGAATGGATCACAGAAGCGCTCAAAAGGCAAAACGGGACATTCAGATTCAAAGGGCCTTGCTTTAGCAACCTCAACTGCATTGTCACTGCTGATCCTCGCAACATGGAGCACCTTCTCAAAACCAAGTTCCCTCTGTTCCCTAAGGGAGGATACTTCAGGAACACGGTTAGAGACCTGCTAGGAGATGGTATATTCAATGCAGACGATGACACCTGGCAGAAGCAAAGGAAAATAGCAAGCATTGAGTTTCATTCAACCAAGTTCAGACAATTAACAACGGAATCCTTGTTCGAGCTTGTCCACTATAGGCTCTTGCCTGTGTTAGAGGCATCGGTTAAGAAATCGGTTGCAATAGACCTGCAAGACATTCTCTTAAGGCTAACTTTTGACAATGTATGCATGATTGCCTTTGGTGTTGATCCAGGTTGTTTGCGCCTGGGTTTACCTAAGATACCATTTGCCAAAGCCTTTGAGGATGCAACAGAAGCCACAGTGTTTCGTTTTGTTACCCCAACGTGCGTTTGGAAGGCCATGAGGCTTCTCAACCTCGGGGTGGAAAGGAAGCTGAAGAAGTCCATAAAAGGGGTTGATGAGTTTGCTGAGAATGTCATTCGGACTAGAAAGAAAGAACTCTCTTTGCAATGTGAAGACACCAAGAATAGGTCAGATTTGTTAACTGTGTTCATGAGGCTGAAGGATGAGAATGGAAGACCCTACTCGGATAAGTTTTTGAGGGATATATGTGTGAACTTTATATTGGCAGGGAGGGACACCTCTTCGGTTGCTTTGAGTTGGTTTTTCTGGTTGCTTGAACAGAATCCTGAAGTGGAGGAGAATATTCTAGCAGAGATATGCATGTTGGTGAGTCAAAGGAACGACATAAAAAGGGAAGAGTTTGATAATTCTTTGAGATTTAGGCCGGAGGAGATCAAGAAGATGGACTATTTGCATGCTGCTTTATCAGAAGCTCTCAGGTTATACCCTTCTGTGCCTGTGGATCACAAGGAGGTTGTTAAAGATGACACATTCCCAGATGGAACGGTACTAAAGAAAGGAACAAAAGTGATCTACGCAATCTATGCAATGGGAAGAATGGAGAGCATATGGGGGAAGGACTGGAAGGAGTTCAAGCCAGAAAGGTGGCTAAGAGATGGGAGGTTCATGAGTGAGTCTGCCTACAAATTCACTGCATTCAATGGTGGTCCTCGTTTGTGCTTAGGCAAAGATTTTGCATACTACCAGATGAAATATGCTGCGGCCAGCATCATATTCCGGTACCGTGTGAAGGTGGTGGAGAACCACCCTGTAGAGCCAAAGCTTGCCTTAACCATGTACATGAAGCATGGGTTAAAAGTTAACCTATACCGCAGGGATGTTGCACAAATTCACAGACACTTAGGAAGGGTTCAAATAAACTAA 1689 0.4411 MTNTTLQYYTSKHTNTMHSHIPFHYNAMTKPRTLNLTFFMQDIQIFEIFLAVLVFLLIHSLRQKRLHGLVVWPVLGMVPSLVTGLRTNLYEWITEALKRQNGTFRFKGPCFSNLNCIVTADPRNMEHLLKTKFPLFPKGGYFRNTVRDLLGDGIFNADDDTWQKQRKIASIEFHSTKFRQLTTESLFELVHYRLLPVLEASVKKSVAIDLQDILLRLTFDNVCMIAFGVDPGCLRLGLPKIPFAKAFEDATEATVFRFVTPTCVWKAMRLLNLGVERKLKKSIKGVDEFAENVIRTRKKELSLQCEDTKNRSDLLTVFMRLKDENGRPYSDKFLRDICVNFILAGRDTSSVALSWFFWLLEQNPEVEENILAEICMLVSQRNDIKREEFDNSLRFRPEEIKKMDYLHAALSEALRLYPSVPVDHKEVVKDDTFPDGTVLKKGTKVIYAIYAMGRMESIWGKDWKEFKPERWLRDGRFMSESAYKFTAFNGGPRLCLGKDFAYYQMKYAAASIIFRYRVKVVENHPVEPKLALTMYMKHGLKVNLYRRDVAQIHRHLGRVQIN 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01635 562 CDD CYP86A 104 540 - -
Vian5g01635 562 PRINTS P450 superfamily signature 344 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g01635 562 PRINTS P450 superfamily signature 408 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g01635 562 PRINTS P450 superfamily signature 486 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g01635 562 PRINTS P450 superfamily signature 495 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g01635 562 FunFam Cytochrome P450 60 550 - -
Vian5g01635 562 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 488 497 IPR017972 GO:0005506|GO:0016705
Vian5g01635 562 Pfam Cytochrome P450 70 534 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g01635 562 SUPERFAMILY Cytochrome P450 68 547 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g01635 562 Gene3D Cytochrome P450 64 558 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g01635 562 PRINTS E-class P450 group I signature 495 518 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g01635 562 PRINTS E-class P450 group I signature 485 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g01635 562 PRINTS E-class P450 group I signature 353 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g01635 562 PRINTS E-class P450 group I signature 407 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g01635 562 PRINTS E-class P450 group I signature 333 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian5g01635 562 PANTHER CYTOCHROME P450 59 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01635 Vian-Chr5 38885711 38888034 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01635 15 558 Cytochrome P450 AT5G23190 71.193 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01635 K15402 - gmx:100809503 1023.08