Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01595 ATGGAGAGATCCTATGTTTTTGTTTTTCTCTGTGTCTCCGTGCTTTGTCTCTTCCTGTCCGAACCCACCAGAGCAGAAGACGATTCCCAGCCACTACTCGCTCTCAAATCCTCCATTGACGTTCTCCACAAGCTCCCATGGCGGCAAGGAGCCGACGTGTGCACCTGGAAAGGGGTCAAAGACTGCTTCAACGGAAGAGTCAGAAAGCTCGTTCTGGAACACTCCAACCTAACCGGTTCTCTCGATGACAAGATCTTGAACCGTTTGGACCAGCTCCGAGTCCTCAGCTTCAAAGGAAACTCACTCTCCGGCCAAGTCCCTGACCTCTCCGCCCTGATCAACCTCAAATCGATTTTCCTCAACGACAACAACTTCTCCGGCGAGTTCCCCTCCTCGGTCGCGCTGCTCCACCGCGTCAAAGTCATTGTCCTGTCGCAAAATCACATCTCCGGCGACATTCCAGCGTCGCTTCTGAATCTCCGGCGACTCTACATCCTCTACCTGGAAGACAACGCGTTCACGGGAAGCATCCCGCCTTTCAACCAAACCAGCCTCAGGTATTTGAATGTCTCCAACAACCGACTCTCCGGCGAGATTCCGGTGACCGCCGCACTGATCCGGTTCAATGCCTCGTCGTTTTCGGGCAACCCGGGGCTCTGCGGGGAGAACATCCTCCAACCGTGCAAAAACGGCAGCGTTCCGTCGGCGCCGCCGATAAGCCCCAGCTATCCGCTGATCCCGGGAGGCACCGCGGCGGCGTCGAAGCGGACGTCATCGAACCGCACCAAACTGATAAAGATAATTGGAGGGTGCGTTGGTGGCGTTGTTTTCATACTGTTGTGCATGGTTGTGGTGTGGGCGATTTGCAGGAAGCGGAAGACGAGGGTGGGTTCCGGAACGAGGAGCAAGGGCGGTGGTGACGTGGCAGAAGGGGAGGCTGGTGCGGCGGGGAGTGCGGGAGGCGGCGGCGGCGAGGGCGGGGACAGTGCTAAACAAGGGGGTTTTGCGTGGGAAGGTGAGGGTCTAGGGAAGTTGGTGTTCTGCGGAGGAGGCGATCGCGAGATGAGTTATAGTTTGGAAGATTTGCTGAAAGCGTCGGCGGAGACTTTGGGGAGGGGTATTATCGGAAGTACGTATAAAGCAGTTATGGAATCAGGGTTCATTGTTACTGTTAAGAGGTTGAAGGATGCAAGATACCCTGGTTTGGAAGAATTCAGAGCTCACATTCATGTTCTTGGAAGGCTCACTCACCCTAATCTGGTCCCACTCAGGGCCTATTTTCAGGCTAAAGAAGAACGTCTTCTCGTTTATGATTACTTCCCCAATGGCAGCCTCTTCTCCCTTATTCACGGATCAAAAACATCCGGCGGGGGAAAACCTCTTCACTGGACATCCTGCCTTAAGATTGCCGAAGATCTAGCAACAGGCCTGCTCTATATCCACCAGAACCCCGGCATGACACATGGAAACCTAAAATCTTCTAATGTGTTGCTTGGTTCTGATTTTGAGTCATGTCTTACTGATTATGGTCTAACTGTTTTTCTAAATCCTGACTCAATGGACGAGCCCAGTGCCACATCTTTATTCTACAGAGCACCTGAATGCCGCAACTTTCAAAGGTCACAAACTCAACCAGCTGATGTATACAGCTTTGGGGTCCTTGTTCTAGAGCTCTTAACTGGCAAAACACCCTTCCAAGACCTTGTTCAGACGTATGGTTCAGACATACCTAGGTGGGTCCGGTCAGTGCGCGAAGAAGAGACAGAGTCCGGTGATGATCCTGCCTCAGGCAATGAAGCATCAGAAGAGAAGCTTCAGGCTCTTCTGAACATTGCCATGGCATGTGTTTCACTGGTGCCAGAGAACAGGCCTACAATGAGAGAGGTTTTAAAGATGATAAGAGATGCAAGAGGGGAGGCGCATGTCTCATCTAACAGTAGTGATCATTCTCCTGGAAGATGGTCAGATACTGTTCAAAGCTTTCCAAGGGAAGAACACCAGAGCATATGA 2010 0.5214 MERSYVFVFLCVSVLCLFLSEPTRAEDDSQPLLALKSSIDVLHKLPWRQGADVCTWKGVKDCFNGRVRKLVLEHSNLTGSLDDKILNRLDQLRVLSFKGNSLSGQVPDLSALINLKSIFLNDNNFSGEFPSSVALLHRVKVIVLSQNHISGDIPASLLNLRRLYILYLEDNAFTGSIPPFNQTSLRYLNVSNNRLSGEIPVTAALIRFNASSFSGNPGLCGENILQPCKNGSVPSAPPISPSYPLIPGGTAAASKRTSSNRTKLIKIIGGCVGGVVFILLCMVVVWAICRKRKTRVGSGTRSKGGGDVAEGEAGAAGSAGGGGGEGGDSAKQGGFAWEGEGLGKLVFCGGGDREMSYSLEDLLKASAETLGRGIIGSTYKAVMESGFIVTVKRLKDARYPGLEEFRAHIHVLGRLTHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGKPLHWTSCLKIAEDLATGLLYIHQNPGMTHGNLKSSNVLLGSDFESCLTDYGLTVFLNPDSMDEPSATSLFYRAPECRNFQRSQTQPADVYSFGVLVLELLTGKTPFQDLVQTYGSDIPRWVRSVREEETESGDDPASGNEASEEKLQALLNIAMACVSLVPENRPTMREVLKMIRDARGEAHVSSNSSDHSPGRWSDTVQSFPREEHQSI 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01595 669 MobiDBLite consensus disorder prediction 296 330 - -
Vian5g01595 669 Gene3D Transferase(Phosphotransferase) domain 1 440 656 - -
Vian5g01595 669 MobiDBLite consensus disorder prediction 640 669 - -
Vian5g01595 669 ProSiteProfiles Protein kinase domain profile. 364 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian5g01595 669 SUPERFAMILY L domain-like 41 223 - -
Vian5g01595 669 FunFam Leucine-rich repeat receptor-like protein kinase 138 230 - -
Vian5g01595 669 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 638 IPR046959 -
Vian5g01595 669 MobiDBLite consensus disorder prediction 643 669 - -
Vian5g01595 669 Pfam Protein kinase domain 367 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian5g01595 669 Gene3D Phosphorylase Kinase; domain 1 351 439 - -
Vian5g01595 669 SUPERFAMILY Protein kinase-like (PK-like) 368 644 IPR011009 -
Vian5g01595 669 Gene3D Ribonuclease Inhibitor 183 232 IPR032675 -
Vian5g01595 669 Gene3D Ribonuclease Inhibitor 25 182 IPR032675 -
Vian5g01595 669 Pfam Leucine rich repeat N-terminal domain 26 59 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01595 Vian-Chr5 38488865 38492727 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01595 14 669 Receptor kinase-like Gene Family AT1G60630 61.237 0.0 771
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vian5g01595 Pkinase 1.7e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01595 - - gmx:100809866 1100.5