Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01585 ATGGGCACCGCAACCGCCTTTTCGCCTCCCACCGTTTCAACCACCAGTAAATGGCTGGGCTTCGTGGCCGCCGTCTGGATTCAGTGCATCTCCGGCAACAACTACACCTTCTCCAATTACTCCGATGCGCTCAAATCCCTCATGCATCTCACGCAGGTGCAACTCAACAACCTCTCCGTTGCTAAAGACATCGGAAAAGCCTTTGGGCTTCTGGCGGGCCTCGCCTCCGACCGCTTCCCGACTTGGGCCATTCTCCTGATAGGCTCCGTTGAAGGCCTAATTGGATACGGAGTTCAATGGCTCGTTGTGAGCCAGAAAATCCAGCCCCTTCCCTATTGGCAGATGTGCGTGTTTCTGTGCATGGGAGGGAACAGCACGACGTGGATGAACACTGCCGTTTTGGTAACGTGCATACGCAACTTCCGTACAAACAGAGGACCCGTTTCGGGGATTTTGAAAGGCTTTGTAGGGTTGAGCACTGCGATATTCACCACGATCTGTTCTGCACTTTTCGCCGACGACCCTGCCTACTTCCTCGTCATGCTCTCTCTCGTTCCCCTCGTTGTTTGTCTCACCGGTATCTTTTTCCTCCGAGAGCTTCCTCACGCCGTCGCCGCCGCCGGAAACGCCGAGGAGGTCAAGTATTTCGGCGTCTTCAACGTCGTTGCCGTCCTCGTCGCGCTCTTCCTCTTGGTCTATGGCTTCGTCCCCAGCCCCGGCGTCCTGGTGTCGCGAGTTTTCGTCGCCGTTCTGCTGGTTATGCTGGCTTCGCCGTTGGGGATTCCGGTGTACACGTACTTCAAGGGACGTCTCGGAGCGGGGAATGACGTGGAGGGGCAGAGAGCGAATGAACCGTTGCTTGGTGGTGGGGAAAAGGAAAACGAAAGCGTGGCGGCGGTTGAAGAGGAGGCTTTGGTGGAGAAGAGAGCGCCGATGGTGGGTGAAGAGCACACGATAATGGAGGTGCTGAAGAGCGTGGATTTTTGGATCTTGTTCGTGTCGTTTCTCTGCGGGGTTGGAACTGGTTTGGCTGTGATGAACAATATGGGTCAAATCGGGTTGGCTCTCGGGTACCCAGATGTCTCACTTTTTGTCTCTTTGACCAGTATTTTCGGATTCTTTGGGCGGATCATCTCGGGTACCGTTTCCGAGTTCACAATCAAGAGAGCAGCAACACCAAGACCTCTCTGGAATGCAGCATCTCAGCTTCTAATGGCTGTTGGTTATATACTGATGGCAATGGCTATGCCAGGTTCTCTATACATCGGGTCTATTTTGGTTGGCATATGTTATGGAGTTAGGCTTGCAATCACAGTTCCAGCAGCCTCGGAGTTATTTGGTCTGAAATACTATGGTCTCATCTATAACATTCTGATCCTTAACCTTCCTCTGGGCTCTTTCCTTTTCTCTGGTTTGCTTGCTGGCATGCTGTATGATATGGAAGCAACGACAACTGAGGGAGGAGGCAACACCTGTGTTGGAGGTCACTGTTACAGGCTGGTCTTTATTGTCATGACCGGAGCATGTATCGTTGGCTTCTTCTTAGACATTCTCTTGTCATTCAGAACCAAAACTGTTTACACAAAGATTTCCATGAGCAAGAAACCCAAGAAATCCTTATCAGCATTAAGCAGCCGTTGA 1641 0.5192 MGTATAFSPPTVSTTSKWLGFVAAVWIQCISGNNYTFSNYSDALKSLMHLTQVQLNNLSVAKDIGKAFGLLAGLASDRFPTWAILLIGSVEGLIGYGVQWLVVSQKIQPLPYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRTNRGPVSGILKGFVGLSTAIFTTICSALFADDPAYFLVMLSLVPLVVCLTGIFFLRELPHAVAAAGNAEEVKYFGVFNVVAVLVALFLLVYGFVPSPGVLVSRVFVAVLLVMLASPLGIPVYTYFKGRLGAGNDVEGQRANEPLLGGGEKENESVAAVEEEALVEKRAPMVGEEHTIMEVLKSVDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYPDVSLFVSLTSIFGFFGRIISGTVSEFTIKRAATPRPLWNAASQLLMAVGYILMAMAMPGSLYIGSILVGICYGVRLAITVPAASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGMLYDMEATTTEGGGNTCVGGHCYRLVFIVMTGACIVGFFLDILLSFRTKTVYTKISMSKKPKKSLSALSSR 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01585 546 Pfam Nodulin-like 17 263 IPR010658 -
Vian5g01585 546 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 18 528 - -
Vian5g01585 546 CDD MFS_Mch1p_like 16 512 - -
Vian5g01585 546 Gene3D MFS general substrate transporter like domains 13 207 IPR036259 -
Vian5g01585 546 Gene3D MFS general substrate transporter like domains 322 526 IPR036259 -
Vian5g01585 546 SUPERFAMILY MFS general substrate transporter 32 524 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01585 Vian-Chr5 38396818 38399565 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01585 17 539 Nodulin-like Gene Family AT4G34950 67.883 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01585 - - gmx:100800237 865.914