Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01553 ATGGCCATTAGAAAATCAAACAAGCTTCCACAACATGCAGTCTTGAAGCAGATCCTTAAGAGGTGTTCAAGCCTAGGAAAGAAAAACGGGTACGATGATGATGGCCACCCCGGTGATGTCCCAAAAGGCCATTTTGCTGTTTATGTGGGTGAAAACAGAACTAGGTACATTGTGCCAATCTCATTCCTCGCTCACCCCGAGTTCCAATCCCTCCTTCGACAAGCTGAAGAAGAGTTTGGCTTCGATCACGAGATGGGTCTCACTATTCCTTGCGAAGAAGTTGTCTTCAGGTCTCTAACATCCTCGTTGAGATGA 315 0.4635 MAIRKSNKLPQHAVLKQILKRCSSLGKKNGYDDDGHPGDVPKGHFAVYVGENRTRYIVPISFLAHPEFQSLLRQAEEEFGFDHEMGLTIPCEEVVFRSLTSSLR 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01553 104 Pfam Auxin responsive protein 27 103 IPR003676 GO:0009733
Vian5g01553 104 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 38 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01553 Vian-Chr5 38099362 38099676 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01553 19 99 Calmodulin-binding Proteins AT3G43120 49.383 4.64e-21 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01553 K14488 - gmx:100790342 206.068