Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01551 ATGGGTGAAAACGAAGAAGCGACCAATGACATGATGCAGAGGCTTCACTGTTCTTCGTTTCTGAAACAGCCGTTGAACATGGAGCAACTCAGCATCCCGCAGTTCAATCCCTCTCAAATGCGCGCCAGGCATCAGCATCAGTTCGACGGTGGGAACAGTAACAAGCGCGCGGGTATACCACCTTCGCACCCGCACCAGATCCCGCCCATTTCGCCCTACTCTCAGATCCCGGTGACGCGTCAGCAGCAAATGGGGTCGCACAACATTTCCCCTACACCCACCCACACGCGATCACTCTCGCAACCTTCCTTTTTCTCCCTCGATTCCCTCCCTCCCCTCAGCCCTTCCCCCTTCCGAGACTCCTCCTCTACGTCTGTCTCAGAAGCTGCTGACGTCTCCATGGAAGATCGTGACGTCACTTCTCATTCTCTCTTGCCACCCTCACCTTTCACCAGAACACTCAACACCTCAACCAACAGCCATTTACCTTTACCCCCTCGCAAAGCACATAGGCGCTCTAACAGTGATATTCCGTTTGGGTTTTCCACCGTTTTGCAATCTTCGCCCCCGCTTATTCCTCTCCGGGGCAGAGAAAACCCCGTTTTGGCGAAACCTGCTCAATTGGTCAAAAGAGAAACACCGTGGGACAGGGGTGTTGACCACAGTAATGTAGAGGGATCCGGGGAGAAGAAATCCCCGGAAGGGGAAGTTGTGGATGATCTTTTCTCTGCTTACATGAATTTAGATAGCTTTGATGCGTTGAACTCTTCTGGTACCGATGACAAAAACGGGACTGAAAATCGTGATGATTTGGATAGTAGAGCGAGTGGGACCAAGACTAATGGTGGTGACAGCAGTGATAATGAAGCTGAGAGTAGTGTTAATGAGAGTGGGGATGGTGCGGCGAGGCAGGGAGGGAGTGAGAAGAGGGAGGGGATGAAGAGGAGTGCGGGTGGGGAGATTGCACCCACCACCAGGCACTATAGGAGTGTGTCCATGGATAGCTTCATTTCGAAGTTGAACTTTGGTGATGAGTCGCCGAAGCTGCCACCGTCGCCGGGGCCGAAAACTGGTTTGATTTCGCCGGGTGGTGGAGTTGATGGCAATTCATCGGCCTTCAGCTTGGAGTTTGGAAATGGGGAGTTTAGTGGGCCTGAATTGAAGAAAATTATGGCCAATGAAAAACTTGCTGAGATTGCCTTGACCGATCCAAAGCGTGCAAAAAGGATTTTGGCCAACCGGCAATCGGCTGCACGATCCAAAGAGCGGAAGATGCGGTACATATCAGAGCTAGAGCATAAGGTTCAGACACTTCAGACGGAAGCCACCACACTATCTGCACAACTTACTCTTTTACAGAGAGATTCTGCTGGACTTACTAACCAGAATAGCGAGTTGAAGTTTCGCCTTCAATCCATGGAACAACAAGCAAAGCTCCGAGATGCCCTAAATGAGGCGCTTACTGCTGAGGTTCAAAGACTAAAGCTTGCTACAGCTGAACTGAGTGGGGATTCACATGGTTCTAGCTGTTTGATTCCTCAGCATTCTGTCAACCCTCTGATGTTTCAGCAGCAGCAGCCTCCCACTGCATCCCAACAAAACATTCATCTTCAACATCAACAGCAACAGCAGCAGCACCACCAGAATGGTAATGGCAACTCCAATTCCGACATAAAACAATAG 1683 0.5062 MGENEEATNDMMQRLHCSSFLKQPLNMEQLSIPQFNPSQMRARHQHQFDGGNSNKRAGIPPSHPHQIPPISPYSQIPVTRQQQMGSHNISPTPTHTRSLSQPSFFSLDSLPPLSPSPFRDSSSTSVSEAADVSMEDRDVTSHSLLPPSPFTRTLNTSTNSHLPLPPRKAHRRSNSDIPFGFSTVLQSSPPLIPLRGRENPVLAKPAQLVKRETPWDRGVDHSNVEGSGEKKSPEGEVVDDLFSAYMNLDSFDALNSSGTDDKNGTENRDDLDSRASGTKTNGGDSSDNEAESSVNESGDGAARQGGSEKREGMKRSAGGEIAPTTRHYRSVSMDSFISKLNFGDESPKLPPSPGPKTGLISPGGGVDGNSSAFSLEFGNGEFSGPELKKIMANEKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSAGLTNQNSELKFRLQSMEQQAKLRDALNEALTAEVQRLKLATAELSGDSHGSSCLIPQHSVNPLMFQQQQPPTASQQNIHLQHQQQQQQHHQNGNGNSNSDIKQ 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01551 560 MobiDBLite consensus disorder prediction 254 327 - -
Vian5g01551 560 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 403 466 IPR004827 GO:0003700|GO:0006355
Vian5g01551 560 SMART brlzneu 401 465 IPR004827 GO:0003700|GO:0006355
Vian5g01551 560 Pfam bZIP transcription factor 405 463 IPR004827 GO:0003700|GO:0006355
Vian5g01551 560 MobiDBLite consensus disorder prediction 342 367 - -
Vian5g01551 560 CDD bZIP_plant_RF2 406 457 IPR044759 GO:0003700|GO:0006355
Vian5g01551 560 MobiDBLite consensus disorder prediction 203 235 - -
Vian5g01551 560 MobiDBLite consensus disorder prediction 38 175 - -
Vian5g01551 560 Gene3D - 404 457 - -
Vian5g01551 560 MobiDBLite consensus disorder prediction 144 163 - -
Vian5g01551 560 FunFam probable transcription factor PosF21 404 457 - -
Vian5g01551 560 MobiDBLite consensus disorder prediction 210 235 - -
Vian5g01551 560 MobiDBLite consensus disorder prediction 276 300 - -
Vian5g01551 560 SUPERFAMILY Leucine zipper domain 405 456 IPR046347 GO:0003700|GO:0006355
Vian5g01551 560 MobiDBLite consensus disorder prediction 72 130 - -
Vian5g01551 560 Coils Coil 421 476 - -
Vian5g01551 560 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 106 552 - -
Vian5g01551 560 MobiDBLite consensus disorder prediction 523 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01551 Vian-Chr5 38072545 38075763 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01551 1 524 bZIP Transcription Factor Family AT4G38900 59.239 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian5g01551 bZIP_1 2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01551 - - gmx:780560 850.892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01551 5 38072545 38075763 Vian5g01551 5 38072545 38075763 ECH