Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01520 ATGGTTCAAAGAATAGTTCTAGGAAACTCGAAGCCATCTTCCTCTCAGCACCAAGATGGCAAAACCAGAAAAACTGATATGATGAAGAAAATGATGAAGTCAAGGTCCTTTCATCTTTCTGATTTTGAGTTTTCTCATTCATCGTCTTCGGTAAGGAGCTTATCTCAACCGAGAAAGGCACCCAATTACATGAAGCCCACCAGCAGTTCAGAAGCAAAGAAAGAGCTTTTCTCGCTTAGTCATCGACATACTCAATCCAGTTCAGATGGTAAGAGTCTACCACAAAAGGGTATGAGAAATTCAAAAGCTACTTTCGTTTCTTGCAAAGAACCTGCAAAAACTTTGTCTAGATCGAGTAGTTTGAATTCAATGAGAACATTAACAAAGAGTAATAGTTTAAAGCCTTGCAAAGCTTGTTCAAAAAATCTCACATCAGCAGTTCTGTTCGAAGACGTGAATGCACCAGAGAGAGCTACCTGCTCTTCAACTTTGAAAGAGTATAACTTCCCCGAGTACCTCACGCTTCACCCTGGAGGAACTGAGTCTGAGGGAGTTTCAGTCATGAAGGTTTGCCCCTATACATACTGTTCTCTTAATGGCCATGGCCATGCTCCTTTGCCTCCATTGAAGAGCTTCATGTCAGAAAGGAGGCATCTTTTGGAGACTCGGAAGAAGGATACGAAGCTGGAAGTTGTGATCCCTCAAAGATGGAAGGTGACCCGCTGTGATACAAAAGAAAACTCTGATATTGAGCAGATTTTCTTTCATGAAAAAACAGCATATGATGAAGCTGCTACAGGTAATCCAACAATCTCTCCCTTGGCACAAGAAATTGGTATGAATTTCATTTTTCAAATCTATGCCAAGGAATGGGAAGGAGCTGAAGAAATGAGAAAATTCAACACCGTCAAAGAGATTGAAAAGCAACAAGATATCAATTTTGCAAAGGATGAGAATGGCATTGCAGCAGAAGAGGATGGTGTCAAGCAAGTTACTCCAGGTATGACTCATGATCTCCTAAAGTCTCAGATGAATTTTGAAGGGGATTTCAGAAACTACTTCACTGCTGCTGCAACTGAAGTAGATAACAAAGGGATCTTTCATCTAGGAGAAGATGTTGAAGATGCAGAAGAAAACCATCCAACTAGCTGTATTCATGAAGAAACCTGTACAGAAAGGTACAGCAACGGTGAACACATGGAGGATATTGAGTTGGATGAGTCCTATTCTCCATGCTGGGAGGAACAACATTTCCGTGAATTCAGCTATGAAGACACTACCGATTCTTCCATCTGCTCAGTGGAGGAGATCAACTCAAAACTCGAGTCGCTATCCGAGAGTTCGCATGATATATCTGAAATGTGGTTAGATGACATCTTTAACAGCAATAATGCAGACATTATGGTTGAAGATGTCAGACTCCAAGAAGCCAAAGAAGAGAGGTCAATCTGTTTTCAAGCACAACCTCATTGTACTAATTTTGTTCTGCAAGACACAAGTGAAAGCATCGAGCTTCTCATTCAAGAAAAATATTATCCATCCAAAGATATAGATTCTGAGTATGACGAATCTACTTTGAGCGAGGAAGTATTTCAGAATCTAGCTAATGAAAAAGATAACAACAGAGTAAATGAGAAACGTTTGGATTATGAGGTTAGTTGTGTCTCAATGTTACTTGATGAAGAGATAGTTGAAAATAGTGAAGGCCACAGCAGTAGTGAAAGTTGCAAGATTGATGAGAGCTATGAAGACAAAGATGAAAGCCTAGAAAATGAAGATGATGATGAATTTAACCAGGAGCACATAATTCACATGTCTAAAGTGCCTGAAGAAAGCACCACCATTATTATTGAGGAGCAAAAATTATCAGAGGAAAATAAAGTTAAAGGTGGTAAGTTGAAGAGCACAGGTGGTGAAGAACAGCACACAAGCAAGAATTGGCAATGGGGAACTAAGAGGAAGAGACCTGTAGAAGAGGAAGAAGAAATGAGAAAGATCAACCCACGAAAGCCAAATTTTCTGCCCTTAGTTTCTGAGGTAGAACCAGAGAAAGTTGATCTGAAGCACCAAATGATAGAGGAAAGAAAAGATGCAGAGGAATGGATGCTTGATTTTGCACTGAGACAAGCTGTCACAAAACTTGCTCCAGCAGGGAAAAGGAAAGTGTCATTACTAGTTGAAGCTTTTGAAGAAGTAATGTCAATGCCCAAATGCGAAGCTCATATAAGAAGTGATTCACCCTTTGCTCATGCAAGACCTATTCAAGCGTGTAGTTGA 2277 0.4005 MVQRIVLGNSKPSSSQHQDGKTRKTDMMKKMMKSRSFHLSDFEFSHSSSSVRSLSQPRKAPNYMKPTSSSEAKKELFSLSHRHTQSSSDGKSLPQKGMRNSKATFVSCKEPAKTLSRSSSLNSMRTLTKSNSLKPCKACSKNLTSAVLFEDVNAPERATCSSTLKEYNFPEYLTLHPGGTESEGVSVMKVCPYTYCSLNGHGHAPLPPLKSFMSERRHLLETRKKDTKLEVVIPQRWKVTRCDTKENSDIEQIFFHEKTAYDEAATGNPTISPLAQEIGMNFIFQIYAKEWEGAEEMRKFNTVKEIEKQQDINFAKDENGIAAEEDGVKQVTPGMTHDLLKSQMNFEGDFRNYFTAAATEVDNKGIFHLGEDVEDAEENHPTSCIHEETCTERYSNGEHMEDIELDESYSPCWEEQHFREFSYEDTTDSSICSVEEINSKLESLSESSHDISEMWLDDIFNSNNADIMVEDVRLQEAKEERSICFQAQPHCTNFVLQDTSESIELLIQEKYYPSKDIDSEYDESTLSEEVFQNLANEKDNNRVNEKRLDYEVSCVSMLLDEEIVENSEGHSSSESCKIDESYEDKDESLENEDDDEFNQEHIIHMSKVPEESTTIIIEEQKLSEENKVKGGKLKSTGGEEQHTSKNWQWGTKRKRPVEEEEEMRKINPRKPNFLPLVSEVEPEKVDLKHQMIEERKDAEEWMLDFALRQAVTKLAPAGKRKVSLLVEAFEEVMSMPKCEAHIRSDSPFAHARPIQACS 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01520 758 MobiDBLite consensus disorder prediction 564 584 - -
Vian5g01520 758 MobiDBLite consensus disorder prediction 1 101 - -
Vian5g01520 758 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 172 179 IPR018506 GO:0020037
Vian5g01520 758 SMART CaM_binding_2 618 734 IPR012417 GO:0005516
Vian5g01520 758 MobiDBLite consensus disorder prediction 628 664 - -
Vian5g01520 758 MobiDBLite consensus disorder prediction 81 101 - -
Vian5g01520 758 MobiDBLite consensus disorder prediction 1 16 - -
Vian5g01520 758 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 9 734 IPR044681 GO:0005516
Vian5g01520 758 MobiDBLite consensus disorder prediction 564 593 - -
Vian5g01520 758 MobiDBLite consensus disorder prediction 41 74 - -
Vian5g01520 758 MobiDBLite consensus disorder prediction 17 40 - -
Vian5g01520 758 Pfam Plant calmodulin-binding domain 644 734 IPR012417 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01520 Vian-Chr5 37777444 37779720 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01520 639 758 Calmodulin-binding Proteins AT2G38800 49.587 3.34e-28 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01520 - - gmx:102670203 1036.56