Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01494 ATGGTGGCGACTCCAAATCTCTTTTTCGAAACTTTTATAATCTTTTTTTTTATTGGATCGTCGTCCCGTCGCGATTCCGCACAATTCCAAATCCACTGCCTATCTCCTTCAGCATCTCGCTCTCAAAGATGGGGTGTGGACTTTGATGATAAATATGAGAAGGAAGAGGAGGAGGAGGAGATGATTATGCGCGCTCTCGAGATTCGAAGAAAGGTCACCGAAGAGGTTTTCAAAGAAGCCATGCGGAAGGGAAAGTTTGGAATCACCTACTCTACTAATTTGATTGGCAGGTTATCCGGTTTTCTGGATCATATCATGATTGAAGCTGCTAACTTGAAAAGATTGCCCGGGTTTTCAAACTCCTCCTTCAATTTACGCGCCAAAACTGTTATTGACGACTCTAAAGTTGTGCCACTTATTAGATGGTTGAAGCACAATGCACTGTCATATCCTCGGATAGCGAAGGTCATTTTGATGTCAAGAGGAAAACCTGAGGCCATACGAAGTTTTGTCATGTGGTTGAAATCGGTACGTGTGAAAGGTGAGTTTCTCGGTGTTGTAATGTTGAAGGCCGGAGATAATATTTTGCAGCGCAGACATGAGGAGCTGGATGAGATTGTTCAATATTTGGAGTCCAATGGAGTTAGGAGGGATTGGATAGGTTATGTCATTAGTCGTTGTCCTCAGTTATTGTCTTACAGCTTAGAAGAAGTGAAGATTCGTGCTCATTTCTTCCTAGACATGGGTTTAAATGAGAAGGATTTTGGGACAATGGTTTTTGATTTTCCTAAAGTTCTTGGTTACTATTCTCTGGAAGAAATGAATGAAAAGGTTAATTACTTAAAAGAATTTGGGCTTCAACTTGAGGATGTGGGCAAATTGCTTGCATTTAGGCCACAATTGATGGCGTGTAGTATCGAGGAACATTGGAAGCCTCTTGTAAAGTATCTGTATTATTATGGGATCACTCGAGATGGCATGAAGAGGATGCTTATCATTAAACCAATGGTGTTTTGTGCTAACTTGGAGAAGACTATTGTTCCAAAGGTAAAATTTTTTGAGGACATAGGGGTTCACAATGAAGGGATTGGCAGCATGCTTGTGAAGTTTCCACCTCTACTCACTTACAGCCTGCACAAGAAAATTAGACCAGTGGTTATATTCTTGATGACCAAAGCTGGAGTCACGGAGAAAGATATTGGCAAGGTTATGGCTCTTGGACCTGAGCTCTTGGGATGCAATATAGTACATAAGCTTGATGTGAATGTAAAATATTTTTTATCTCTTGGCATACGTCTTCGGCAATTGGGTGAGATGATTGCTGATTTCCCGTTGCTCCTCCGATACAATCCAGATGTCCTTCGTCCCAAGTATATTTATCTGCGAAAATCCATGGTCAGGCCTTTGGAAGATGTCATTGAGTTTCCAAGGTTTTTCAGTTATTCTCTTGAGGGTCGAATTATCCCAAGGCACAAGGTTCTAGTGGAGAACCATATTAATATTAAGCTGAGATATATGTTGGCTAGCACTGACGAAGAATTCCGCAAAATGGTTAAGGGCTTGATTGGAAAGCGCAGAAGATTTGAATCTGCTGTCACAAATGAGGGTACTACCCATCCCCAATCTGTTATCACTGAAGATATTTCTACACCTCAGGCATAA 1662 0.4122 MVATPNLFFETFIIFFFIGSSSRRDSAQFQIHCLSPSASRSQRWGVDFDDKYEKEEEEEEMIMRALEIRRKVTEEVFKEAMRKGKFGITYSTNLIGRLSGFLDHIMIEAANLKRLPGFSNSSFNLRAKTVIDDSKVVPLIRWLKHNALSYPRIAKVILMSRGKPEAIRSFVMWLKSVRVKGEFLGVVMLKAGDNILQRRHEELDEIVQYLESNGVRRDWIGYVISRCPQLLSYSLEEVKIRAHFFLDMGLNEKDFGTMVFDFPKVLGYYSLEEMNEKVNYLKEFGLQLEDVGKLLAFRPQLMACSIEEHWKPLVKYLYYYGITRDGMKRMLIIKPMVFCANLEKTIVPKVKFFEDIGVHNEGIGSMLVKFPPLLTYSLHKKIRPVVIFLMTKAGVTEKDIGKVMALGPELLGCNIVHKLDVNVKYFLSLGIRLRQLGEMIADFPLLLRYNPDVLRPKYIYLRKSMVRPLEDVIEFPRFFSYSLEGRIIPRHKVLVENHINIKLRYMLASTDEEFRKMVKGLIGKRRRFESAVTNEGTTHPQSVITEDISTPQA 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01494 553 Pfam mTERF 152 283 IPR003690 GO:0003690|GO:0006355
Vian5g01494 553 Pfam mTERF 281 514 IPR003690 GO:0003690|GO:0006355
Vian5g01494 553 SMART mt_12 401 432 IPR003690 GO:0003690|GO:0006355
Vian5g01494 553 SMART mt_12 437 468 IPR003690 GO:0003690|GO:0006355
Vian5g01494 553 SMART mt_12 328 359 IPR003690 GO:0003690|GO:0006355
Vian5g01494 553 SMART mt_12 469 500 IPR003690 GO:0003690|GO:0006355
Vian5g01494 553 SMART mt_12 221 251 IPR003690 GO:0003690|GO:0006355
Vian5g01494 553 SMART mt_12 292 323 IPR003690 GO:0003690|GO:0006355
Vian5g01494 553 SMART mt_12 364 396 IPR003690 GO:0003690|GO:0006355
Vian5g01494 553 SMART mt_12 256 287 IPR003690 GO:0003690|GO:0006355
Vian5g01494 553 MobiDBLite consensus disorder prediction 533 553 - -
Vian5g01494 553 PANTHER CGI-12 PROTEIN-RELATED 195 287 IPR003690 GO:0003690|GO:0006355
Vian5g01494 553 Gene3D Transcription termination factor 3, mitochondrial 295 521 IPR038538 -
Vian5g01494 553 MobiDBLite consensus disorder prediction 532 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01494 Vian-Chr5 37472934 37476725 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vian5g01494 mTERF 1.4e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01494 K15032 - mnt:21401514 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01494 5 37472934 37476725 Vian5g01494 5 37472934 37476725 ECH