Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01473 ATGAAGACTTATCTAGAGAAAAACAAGACACTTGCCAAGCCTGGTCACAAAAGTTCTGCCCCCATGAATGAAATACCAAACCTTCCCAAAAGCCGAACCCCTTGGTCTACTTCTCAGGCTTCCGTTTTTCGTAATTATGGGTCCACTCCAACTTCCAGTTTAACTCCAGCTAGTCCTCACTTATATTCCCCATGGTTCGGAAGTCAGATCTGGAATAGGCCAACTCAATATGGTTCTCTATATCAAAGTAGTTCGTTCTCCAATTATCCTATGGCAGCAAGGGTTGGTCAGAGTTCTCTATTAGCTTCTGCGAATACACTACAAAGGACTTCTGCTGAAAACAACATGGGTTTCAAGAACCATTCTTACAAGATCTCACAACCTACAAGTAACGTAACTCCCAAAGCTAAAGAAAATGAAAGAAGGCCTTCAATCCAAGGAACCAACTTGAAAGGATCAACAAGTAGTGTGACCAGTGAAAGCAAGCAAAGAACTGCTGTAGTCAATGATAAAAAGAATGACGGTGGATCAACAAAGGTGCATATACGTCTTTGCAATGCAAGTAACAATACAAAAGAACAAAGAAAAAGAAAGGCAGAGCAGACATCATCCAAGATCTTAAGTATAAAAAGCATATATGAGCGGCAGGATATTCGTTCAACTAAGCAACAACAATCCAGGATGATGTCTGGAACTGTGGGAGGTGCCAAGAGTGTGACTCATACTGAAAATATCAATGCTGATGATGAAAATACAAATATTGAAACGGAAAACTTTGAAGCAAATCCAAGTGATCCGAATCAGAATTTGCATATAGACCTCAATGCATCTTCCGCTAATCCTGTACTTGAAGAGGGATGGCCTACTGCTGAGCTCCTTTTACTTCAACAGGAAAGCGATGATACAAAAGAACAAAGAAAAAGGAAGGCGATGAATAAATCATTTAAGAGACGAAAGAAGATCATGAAGCTGGTGGATATCTTTTCAGCTAAGCATGAACAATCCAGCATGACAGTCAGAAATGGGGGAGGTGCAAACAATGTGACTAGTATTGAAAATTCTAATTCTATTCAAGACAAAACAAATATTGGGTCGAATCATTTTGGAGCAAATCCAACTGAGAGGAACAGGAACTTGAGTACAAAACTATCTGCCACTAATCCTCAACTTACAAAGGAGGAAAGTGATGAAGAAAAAGAACAAAGAAGGCAATCAAAGAAGAAATCAGCCAAGAGATCAAGGATGAAGATGAAGATGGAACGTGAAAGGTTAAATGCTTCCATTGAAAATCTAGGTGTCGAAAATGCTGCGCTCAGAGAAAAGCTTCATGACCTTCTTCATGAGTGTGATAAGCTCATAGAAAATAATAATTCCATACTGGATGAACTCAATGAGATGTATGGTAAAGAAAAAGTAATGGAAGTTTTGAGTATGCAGTATGCTGACTCGGGCCAATGCTGA 1461 0.3936 MKTYLEKNKTLAKPGHKSSAPMNEIPNLPKSRTPWSTSQASVFRNYGSTPTSSLTPASPHLYSPWFGSQIWNRPTQYGSLYQSSSFSNYPMAARVGQSSLLASANTLQRTSAENNMGFKNHSYKISQPTSNVTPKAKENERRPSIQGTNLKGSTSSVTSESKQRTAVVNDKKNDGGSTKVHIRLCNASNNTKEQRKRKAEQTSSKILSIKSIYERQDIRSTKQQQSRMMSGTVGGAKSVTHTENINADDENTNIETENFEANPSDPNQNLHIDLNASSANPVLEEGWPTAELLLLQQESDDTKEQRKRKAMNKSFKRRKKIMKLVDIFSAKHEQSSMTVRNGGGANNVTSIENSNSIQDKTNIGSNHFGANPTERNRNLSTKLSATNPQLTKEESDEEKEQRRQSKKKSAKRSRMKMKMERERLNASIENLGVENAALREKLHDLLHECDKLIENNNSILDELNEMYGKEKVMEVLSMQYADSGQC 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01473 486 SMART brlzneu 394 458 IPR004827 GO:0003700|GO:0006355
Vian5g01473 486 MobiDBLite consensus disorder prediction 1 36 - -
Vian5g01473 486 MobiDBLite consensus disorder prediction 114 134 - -
Vian5g01473 486 MobiDBLite consensus disorder prediction 356 417 - -
Vian5g01473 486 MobiDBLite consensus disorder prediction 114 178 - -
Vian5g01473 486 MobiDBLite consensus disorder prediction 356 390 - -
Vian5g01473 486 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 396 452 IPR004827 GO:0003700|GO:0006355
Vian5g01473 486 MobiDBLite consensus disorder prediction 145 164 - -
Vian5g01473 486 CDD bZIP_plant_GBF1 399 450 IPR045314 GO:0003700|GO:0006355
Vian5g01473 486 Coils Coil 421 455 - -
Vian5g01473 486 Gene3D - 386 456 - -
Vian5g01473 486 PANTHER G-BOX-BINDING FACTOR 3-RELATED 300 469 IPR044827 GO:0003700|GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01473 391 472 bZIP Transcription Factor Family AT4G36730 43.902 2.30e-14 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01473 - K18740 var:108339461 915.22