Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01356 ATGGCCTCTGTAGCACTCACCACCACCCTCCCCTCTCTCCGCCTCCGCCGCAACCCCGCCGCCGCCTCCGCCCTCAAACCCAACCGTCTGACTTCCTTTCCACCTTCCTCACTCAAACCAAACCTCAGAACTTCGATTTCCTCCTTCCCAAATATCTCACTTAAAAAAACGAACCTCGTTCTCAGTCGCAAGCACTCTTCTCTCACTGTTAGAGCTACCGCAGCCTCCATCACACCGGCTCCGGCTCCGGCGCCGACTCAGCCATGGCAAGGTGCCGCAATAAAACCACTATTAGCCTCCATCGCCACGGGAGTGATCCTCTGGTTCACACCAGTTCCCGCGGGCGTAAACCGTAACGCGTGGCAATTGCTCGCGATCTTCTTAGGCACAATCGTCGGCATTATAACCCAACCACTGCCCCTCGGCGCGGTTGCGATATTAGGTTTGGGCGTTTCCGTTCTCACCAAAACCCTAACGTTCGCCGCCGCGTTCTCTGGCTTCGGTGACCCGATCCCCTGGCTCATCGCACTCGCCTTCTTCTTCGCCAAGGGATTCATTAAAACTGGCCTCGGGAACCGTGTTGCGTACCAGTTCGTGAAGCTCTTCGGCAGCTCCTCGCTCGGGTTAGGTTACAGCCTTGTCTTCAGCGAGGCGCTGCTGGCGCCGGCGATCCCCTCAGTGTCAGCGAGGGCGGGCGGGATATTCCTTCCGCTCGTAAAGGCGCTGTGCGTGGCGTGCGGGAGCAACGTTGGCGACGGGACGGAGAACAGGTTGGGGGCGTGGCTCATGCTCACGTGCTTTCAGACTTCGGTGATTACGTCGGCGATGTTTCTAACGGCGATGGCGGCGAATCCGCTCTGTGCGACGCTGACGCAAAGTTCCATTAACCAGACGATTGGGTGGTTGGACTGGGCCAAAGCTGCAATTGTCCCTGGCCTGGTGTCGCTGGTGTTGGTTCCGTTGATTTTGTATGTTATATACCCTCCGACTCTGAAGAGTAGTCCTGATGCTCCTAAGCTTGCGAGAGAGAAGTTGGAGAAAATGGGGCCCATGACAACCAATGAGAAGATCATGACTGCTACGTTGTTTCTCACGGTGGGACTTTGGGTATTTGGAGGACTTCTTAATATTGATGCTGTATCTGCTGCAATTCTTGGATTATCTGTACTTCTTGTCACAGGTGTTGTTACATGGAAGGAGTGCTTAGGGGAAGGAGTTGCCTGGGATACTCTCACATGGTTTGCTGCCCTCATAGCAATGGCTGGGTATTTGAACAAATATGGCCTCATTTCTTGGTTCAGTCAAACGGTAGTCAAGTTTGTTGGTGGATTGGGTCTATCATGGCAACTATCTTTTGGGATTCTGGTTCTTCTCTACTTTTACTCTCATTACTTCTTTGCAAGTGGAGCTGCTCATATTGGCGCCATGTTTACTGCATTTTTGTCTGTTTCCACTGCTCTGGGGACTCCGCCATTCTTCGGAGCCATAGTGCTGTCGTTCCTCTCCAACCTTATGGGTGGCCTTACTCATTACGGAATCGGATCAGCTCCGGTGTTTTTCGGTGCCAACTATGTTCCCCTTGCTAAATGGTGGGGTTATGGATTCCTCATTAGTATTGTTAACATTATAATCTGGCTTGGACTTGGAGGGGTTTGGTGGAAATTCATTGGCTTATGGTAA 1680 0.5268 MASVALTTTLPSLRLRRNPAAASALKPNRLTSFPPSSLKPNLRTSISSFPNISLKKTNLVLSRKHSSLTVRATAASITPAPAPAPTQPWQGAAIKPLLASIATGVILWFTPVPAGVNRNAWQLLAIFLGTIVGIITQPLPLGAVAILGLGVSVLTKTLTFAAAFSGFGDPIPWLIALAFFFAKGFIKTGLGNRVAYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKALCVACGSNVGDGTENRLGAWLMLTCFQTSVITSAMFLTAMAANPLCATLTQSSINQTIGWLDWAKAAIVPGLVSLVLVPLILYVIYPPTLKSSPDAPKLAREKLEKMGPMTTNEKIMTATLFLTVGLWVFGGLLNIDAVSAAILGLSVLLVTGVVTWKECLGEGVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVSTALGTPPFFGAIVLSFLSNLMGGLTHYGIGSAPVFFGANYVPLAKWWGYGFLISIVNIIIWLGLGGVWWKFIGLW 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01356 559 CDD ArsB_NhaD_permease 131 553 - -
Vian5g01356 559 NCBIfam DASS family sodium-coupled anion symporter 111 553 IPR001898 GO:0016020|GO:0022857|GO:0055085
Vian5g01356 559 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 66 559 IPR030676 -
Vian5g01356 559 Pfam Sodium:sulfate symporter transmembrane region 96 559 IPR001898 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01356 Vian-Chr5 36166124 36169081 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01356 10 558 Antiporters AT5G12860 79.533 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01356 - - gmx:100793559 980.704