Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01351 ATGGATGAACACATGCACGGGATGGGAGGGATGGCGTCGCCGCCAACCGCAAACGACACCATGGGCACCATGATGCACCACAAGATGATGATGCACATGACCTTCTTCTGGGGCAAAGACACTGATATTCTCTTCCAAAACTGGCCGGGAGGCAAATCGGATATGTATATCTTGGCCCTCGTTTTCGTCTTCGTCATGTCGGTTTTCGTGCAGCTGCTCTCGCACACCCGTTTCATCAAACCCGGTTCAAACCATGTCGCGGCCGGTCTGTTCAAGACCCTCTTGTTCGCTTTCAGGGTTGGTCTCGCTTATCTGGTTATGCTTTCAATCATGTCTTTTAACGGTGGTGTTTTCTTGGTTGCTGTGCTAGGTCAGACCTTGGGGTTTCTCATTACAACATTCGCTTTCAACAAATCGCCCCATGACGAGGGTTTCGATCTTCCTCCAGTTTCTTGTTGA 459 0.5011 MDEHMHGMGGMASPPTANDTMGTMMHHKMMMHMTFFWGKDTDILFQNWPGGKSDMYILALVFVFVMSVFVQLLSHTRFIKPGSNHVAAGLFKTLLFAFRVGLAYLVMLSIMSFNGGVFLVAVLGQTLGFLITTFAFNKSPHDEGFDLPPVSC 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01351 152 Pfam Ctr copper transporter family 85 131 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vian5g01351 152 Pfam Ctr copper transporter family 33 77 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vian5g01351 152 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 22 139 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01351 Vian-Chr5 36113725 36114183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01351 34 152 Inorganic Solute Cotransporters AT5G59030 45.968 2.05e-33 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01351 K14686 - gmx:100306175 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01351 5 36113725 36114183 Vian5g01351 5 36113725 36114183 ECH