Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01318 ATGGAGCCCAACTTTCTCAGCGATGACCTGTTTGATGAATCGGAGAGCATATCATACCTCTCAGAATCACTTGGTTTTGCTAGAATGGATCCTTCACCAGAAGACAACGACTTCTCAGAAACCGTCAAGTTCATAAGCCAGATCCTCATGGAAGAGAACGTTCAGCAACAGAATCCATTCTATGATTCACTCACCTTGCAGGTTACCGAGAAGTCCTTCTATGATACTCTAGTGGGTAACCTTTCCCCTAATCAACACGCCCTTGTTCTCAGCCCCCAAGCTGAAACCACCACCACCAACAACAACAACAGCAGCTTTTTAGATGAATATTTCCCTTCTCCGGATTCTGCTTCTGCTTCTGCTTGTGCTCTTCAGTTTAACCCCCACACCCTTTCTCAGCCACCTTCATTTACTGTTAGTCATGGATTCTCAGATTTGGATTCTTCTATCGTCAAACTCCTGGCACAGAATATGTTCAACGATGCTGATTCTGTTTCCCAGTTCAGGAGAGGATTAGAGGAAGCTACCAAGTTTCTTCCTTTTGGCCCTGAGCTTGTTACTGGTCTCCATTCAAACGGTGAGGAACAGATCAATAGTTTTGGAGTTAATTTCAAGAGCAGAAAGAATCACGAGCGTCAAGAGAGAGATACCACAGAAGAAGAAGAAGGGAGAAGTAGTAAGCAATCGACACTTAGCCTTGTTGATGAGAGTGACATTTCAGATGCTATAGATCGGGTGTTTCTGAGTGTGGAAAACGTGGGTAGTGAACACAATTCCTTGCAGAGTGGAGCAGTGAAAGGTGAGGAGCGAGATGGAGGGAAGGACCGATCAAAGAAAAAAGGGAGGAAGAAGGAAACTGTGGATTTGAGGAATCTTCTACAGATGTGTGCACAATCTGTGTATGCCAATGACATTAGAGCTGCCACCGAATTACTAAAGCAGATTCGGCAACACTCTTCTCCCTTTGGAGATGCATCGCAGAGGGTAGCTCACTACTTCGCCAATGGTCTTCATGCACGCTTGGTTGGGGCTGGTTCTGGCGGTCATGAACAATTTTCTTTTCTGAACTCTCAGAGGATTACTGCTGCAGAGTACCTGAAGGCATATCAAGTGTTTCTATCTTCCACCCCTTTCAAAAAGTTTACATATTTCTTTGCGAACACAATGATTATGGAAGCTGCTGCAAAATCAGAAACCGTCCATATCATTGATTTTGGCATCCTGTATGGTTTCCAGTGGCCAATTCTTATAAAGTTTTTATCAAACAGAGAGGGTGGTCCTCCCAAGCTGAGGATCACAGGGATAGAGTTTCCCCAACCAGGCTTTCGTCCCTCGGAAAGGATTGAGGAGACGGGTCACCGTCTTGCTAACTATTGTAAGCGTTACAATGTTCCCTTTGAATACCATGCCATAGCATCAAGGAACTGGGAAACTATTCAGGTGGAAGCCCTTAAAATTGAGAGCAATGAGATAGTTGCTGTCAACTGTCACATGAGGTTTGAACATTTACTGGATGAGAGCACTGTTGAAGTTAACAGTCCTAGAAATGCAGTCCTGCATTTGATCAGGAAGATAAATCCGGATATCTTTACTCAGATCATTATTAATGGATCATATAGTTCCCCTTTCTTTACCACACGGTTTAAGGAGGCACTGTTCCATTTTTCTGCTGTTTATGATCTGTTTGACACTGTCATACCTCGTGAAAATGATTGGAGAATGACGATTGAGAGTGAGCTTTTGGGTCGGGAGGCTGTGAATGTTATAGCGTGTGAAGGTTCTGACAGGGTTCACAGACCTGAGACATACAAACAATGGCAAGTTAGGAATACAAGGGCTGGTTTCAAGCAGCTCCCATTGAAGGAGGAATTGATGGCCAAATTTAGGACTAAGTTAAAGGATTATCACAGAGATTTTGTCTTCGATGAAGATAACAATTGGATGATTCAAGGTTGGAAAGGCCGCATTTTTAATGCTTCCACTTGTTGGGTGCCCACATAA 2001 0.4368 MEPNFLSDDLFDESESISYLSESLGFARMDPSPEDNDFSETVKFISQILMEENVQQQNPFYDSLTLQVTEKSFYDTLVGNLSPNQHALVLSPQAETTTTNNNNSSFLDEYFPSPDSASASACALQFNPHTLSQPPSFTVSHGFSDLDSSIVKLLAQNMFNDADSVSQFRRGLEEATKFLPFGPELVTGLHSNGEEQINSFGVNFKSRKNHERQERDTTEEEEGRSSKQSTLSLVDESDISDAIDRVFLSVENVGSEHNSLQSGAVKGEERDGGKDRSKKKGRKKETVDLRNLLQMCAQSVYANDIRAATELLKQIRQHSSPFGDASQRVAHYFANGLHARLVGAGSGGHEQFSFLNSQRITAAEYLKAYQVFLSSTPFKKFTYFFANTMIMEAAAKSETVHIIDFGILYGFQWPILIKFLSNREGGPPKLRITGIEFPQPGFRPSERIEETGHRLANYCKRYNVPFEYHAIASRNWETIQVEALKIESNEIVAVNCHMRFEHLLDESTVEVNSPRNAVLHLIRKINPDIFTQIIINGSYSSPFFTTRFKEALFHFSAVYDLFDTVIPRENDWRMTIESELLGREAVNVIACEGSDRVHRPETYKQWQVRNTRAGFKQLPLKEELMAKFRTKLKDYHRDFVFDEDNNWMIQGWKGRIFNASTCWVPT 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01318 666 ProSiteProfiles GRAS family profile. 280 664 IPR005202 -
Vian5g01318 666 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 222 653 IPR005202 -
Vian5g01318 666 Pfam GRAS domain family 289 663 IPR005202 -
Vian5g01318 666 MobiDBLite consensus disorder prediction 263 285 - -
Vian5g01318 666 MobiDBLite consensus disorder prediction 200 233 - -
Vian5g01318 666 MobiDBLite consensus disorder prediction 205 226 - -
Vian5g01318 666 MobiDBLite consensus disorder prediction 258 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01318 Vian-Chr5 35886334 35888334 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01318 41 666 GRAS Transcription Factor Family AT1G07530 43.994 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vian5g01318 GRAS 4.2e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01318 - - gmx:100795855 924.465