Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01317 ATGGAGCACCCAAACTTCTTCTTCGGTGAAGAAGAGGATGACATGGCCCATCTCACAGACCCGCTTGTTTTTCCGACTTTGGATCCTTCTTCCAGAGACCCTTCGCTCGAAGACAACGACTTCTCAGAAACTGCAAAGTTCATCAGCCAGATCCTCATGGAAGAGAACGTCGAACACAAGCCATTCTACGACTCACTCACCTTGCAAGTTACCGAGAAATCCTTCTACGACGCTCTCGCCGGTAACCTACCTCCTTCCCCCAATCAACACCCCCTTGCTTTCAGTCCTGAAGCTGAAACCACCACCACCACCACCACCACCGCCAGCACCAGCAGCAACAGCAGTAACAACAATTTTTCAGATGAAAATTCCAGTGAGTTGAAGCTTCCTTCTCCAGATTCTGTTTTTAAGTTTAACTCCCGCGCCCTTTCTCAACCGTCTCCCTCAATTACCGCCAACCATGGACTCCAAGATTTGGATTTTTCTATTGCCAAACTCTTATCACAGAATATTTTCAATGATGTGGACTCCGTTTCCCAGTTTAGGCGGGGCCTGGAGGAAGCTAGCAAGTTTCTTCCTCCGGGACCTAACCTTGTGACTGGTCTAGGTTCAAACGGAGAACAAGCGTTCAATAAGTTTGGAGACACCTCGTATGGGTTGAGTGGGAAAAATCACAAGAGGGACGAGAGATACGCTATAGAGGAGGAAGAAGAAGAAGAAGGGAGAAGTAACAAGCAGACAGCACTTTCCCATGTCGATGAAAGTGACTTGTCTGATGCTTTCGATCGGGTGTTGCTTCATGAGGGAAACATGTGTAGCCAAATCAATTCTTTGCCAGGTGGAGCAGTGAAGGTTGATGAAGCAGATGGAGGGAAGAGTCGTTCAAGGAAAAAAGAGAGGAACAAGGAAACAGTTGATTTGAGGAATCTTTTGCTGATGTGCTCACAATCTGTGTATGCCAATGACAACAGGACGGCCAATGAATTGCTAAAGCAGATTAGGCAACACTCTTCTCCCTTTGGAGATGCATCACAGAGGTTGGCTCATTACTTTGCCAACGGCCTTGAGGCACGCTTGGTTGGGGATGGTACAGTTGCACAGGGCATGTATTCTTTTCTGACCTCTAAGAGGAGCTCTGCTGCTGAGTTTCTCAAGGCATACCAGGTTTTCCTTTCCGCTTCCCCTTTCAAGAAGTTTACATATTTCTTTGCGAATAAAATGATTATGAAAGCAGCTGCAAAGGCAGAAACCATCCATATTATTGATTTTGGCATCCTATATGGTTTCCACTGGCCAATTCTTATTAAGTTTTTATCAGATAGAGAAGGTGGTCCTCCCAAACTGAGGATCACAGGGATAGAGTTTCCCCAACCAGGCTTTCGTCCCTCTGAAAGGATTGAGGAGACGGGTCACCGTCTTGCTAACTATTGTAAGCGTTACAAGGTTCCCTTTGAATACCATGCCATAGCATCAAGGAACTGGGAAACTATTCAGGTGGAAGCCCTTAAAATTGAGAGCAATGAGTTTGTTGCTGTCAATTGTCATATGAGGTTTGAGAATTTACTGGATGAGTCTATTGAAGTGGACAGTCCTAGGAATGCAGTCTTGCATTTGATCAAGAAGATAAATCCAAATATTTTTACTCAGTCCATCACTAATGGATCATATAATGCCCCCTTCTTTGCCACAAGATTTAGGGAGGCTTTGTTTCATTATTCTGCTATTTATGATATGTGTGACACTGTCATGCCTCGAGAAAACGAATGGAGGTTGATGATTGAGAGAGAGCTTTTGGGCCGGGAGGCTATGAATGTTATAGCATGCGAAGGTTCTGAGAGAATTGAAAGGCCTGAAACATACAAACAATGGCAGGCTAGGAATACAAGGGCTGGCTTCAAGCAGCTCCCACTGAATCCGGAATTGATGACCAAGTTTAGGACCAAGTTAAAGGAATGGTACCACAGAGATTTTGTCTTTGATGAAGATAACAATTGGATGCTTCAAGGTTGGAAGGGCCGCATTTTGTATGCTTCCACTTGTTGGGTGCCCGCATAA 2055 0.4506 MEHPNFFFGEEEDDMAHLTDPLVFPTLDPSSRDPSLEDNDFSETAKFISQILMEENVEHKPFYDSLTLQVTEKSFYDALAGNLPPSPNQHPLAFSPEAETTTTTTTTASTSSNSSNNNFSDENSSELKLPSPDSVFKFNSRALSQPSPSITANHGLQDLDFSIAKLLSQNIFNDVDSVSQFRRGLEEASKFLPPGPNLVTGLGSNGEQAFNKFGDTSYGLSGKNHKRDERYAIEEEEEEEGRSNKQTALSHVDESDLSDAFDRVLLHEGNMCSQINSLPGGAVKVDEADGGKSRSRKKERNKETVDLRNLLLMCSQSVYANDNRTANELLKQIRQHSSPFGDASQRLAHYFANGLEARLVGDGTVAQGMYSFLTSKRSSAAEFLKAYQVFLSASPFKKFTYFFANKMIMKAAAKAETIHIIDFGILYGFHWPILIKFLSDREGGPPKLRITGIEFPQPGFRPSERIEETGHRLANYCKRYKVPFEYHAIASRNWETIQVEALKIESNEFVAVNCHMRFENLLDESIEVDSPRNAVLHLIKKINPNIFTQSITNGSYNAPFFATRFREALFHYSAIYDMCDTVMPRENEWRLMIERELLGREAMNVIACEGSERIERPETYKQWQARNTRAGFKQLPLNPELMTKFRTKLKEWYHRDFVFDEDNNWMLQGWKGRILYASTCWVPA 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01317 684 MobiDBLite consensus disorder prediction 93 130 - -
Vian5g01317 684 MobiDBLite consensus disorder prediction 79 131 - -
Vian5g01317 684 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 239 677 IPR005202 -
Vian5g01317 684 MobiDBLite consensus disorder prediction 278 302 - -
Vian5g01317 684 Pfam GRAS domain family 307 681 IPR005202 -
Vian5g01317 684 MobiDBLite consensus disorder prediction 233 249 - -
Vian5g01317 684 MobiDBLite consensus disorder prediction 233 254 - -
Vian5g01317 684 MobiDBLite consensus disorder prediction 287 302 - -
Vian5g01317 684 ProSiteProfiles GRAS family profile. 298 682 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01317 Vian-Chr5 35880774 35882828 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01317 46 684 GRAS Transcription Factor Family AT1G07530 48.121 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vian5g01317 GRAS 8.6e-116 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01317 - - gmx:100795855 1009.98