Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01306 ATGGGAAACGGCATAGGGAAGTTAACGGTGTGCTTCACCGGACATAACAGTGGGGGACGTCGGAAGCAGGATATATCCATTTTAATAACGGAGCCTCTGGACGAGGGTTTGGGTCACTCTTTCTGCTACGTTAGACCCGACCCGACCGGGATATCGTCATCGAAGGTGCACTCGGAGGAAACAACGACGTTCAGAACAATCTCTGGGGCTTCGGTGAGCGCTAACACATCGACGCCGTTATCGACGGCGTTCGTGGACTTGTACTCCTACGGTTGCATAGACCGAGCGGCGGCGTTCGAGAGTTCAACGTCGTTCGCGTCGCTTCCTCTGCAACCGATTCCGCGGAACCTGGTGAACTCAGGGCCCTTCTCGGGGAACCTGGGCGGTGGTGGGTTTCCGGGCTCGGGCCCGCTAGAGAGGGGTTTCATGTCGGGCCCCATCGAGCGCGGGTTCATGTCGGGGCCCATCGATCGTGGACTTTTTTCGGGGCCGATGGAGAGGGAGGGAAACGGATCGGATCATTTCCCGAGAAGCTTCTCGCACGGAGGGATGGGTTTAGGTTTGGGATTAGGTTTGAGAGTGAGAACGAGGAAGGGTCGGTGGATTCGTGTTTTGCAGAGGGCGATTTCGAAGACTCTCTCTCGGGGGCAGAACTCGATTGTGGCTCCGATCAAAGGAGTGGTGGTAAAAGAGCCGGAGTGGATGGTGGCTGCGGCGGAGAAGCATAATGAGAATCTGAGTGTGAATTTGAGCAGTGAGGGGAGCTTGGAGGACGATGATTCTATGGAGAGTCAGAATCTTCAGTGGGCTCAGGGGAAAGCAGGGGAAGATCGTGTCCATGTTGTTGTGTCTGAGGAACACGGCTGGGTTTTCGTGGGGATCTATGATGGTTTCAATGGACCCGATGCTCCTGATTACCTTCTCTCGAATCTCTACACCGCGGTGCACAAGGAGCTGAAAGGGTTGTTGTGGGATGATGGGTCTACCCAGGAAAATTCGACACCTAAAGAGGAGGTGTTGCGGGATGTCACAGACGTTGCAGATGTAGATGCATGCTCTCACTGTGTTGAACATGAAAATAGTAACTGTAATAAGAGTACTAGTAAGAAAGGTAGGAATTCGAGGAACAGGTACAAAGGTGCTGCGAATAAGTGGGAGGAGAATCAACGGAGGTGGAAGTGTGAGTGGGATAGGGAGAGGTTAGAGCTTGATCGGAGATTAAAGGAGCAACTGAATTCAAGTCGATCAGGATGTGGTGGAGCAGCAAGTTCAATTAATCATGCGGATGTTTTGGAAGCTCTTTCTCGGGCTCTGAGGAAGACTGAGGAGTCTTACCTTGATGTTGCGGATAAGATGGTGATGGAGAATCCTGAACTTGCCTTGATGGGTTCTTGTGTTCTTGTGATGTTGATGAAGGGGGAGGATGTTTACGTGATGAATGTGGGGGATAGCCGCGCTGTGCTGGCTCAGAAGGCTGAGCCTGATTATTGGCTCGGCAAGATCAGGCAGGACTTGGAGAGGATCAATGAGGAGACGATGAATGATCTTGAATCTTGGGATGTTGATAACTCCAATTTGGTTCCAAGTCTTAGTGCGATTCAGCTTACTAAAGATCATAGTACAAGTGTTGAAGAAGAAATCCAGAGAATTAAAAAGGAGCACCCAGATGATCCTTGTGCTGTTGTAAATGACCGTGTTAAGGGTTCTCTCAAGGTTACCCGAGCCTTTGGTGCCGGATTTCTCAAACAGCACCACAGATTAGGTCCAAAGGACAAATTTTTGATTCTATGCTCCGATGGGCTCTATCAGTACTTGTCAAACGAAGAAGCAGTGGCTGAAGTTGAGCATTTCATCACATTGCAACCTGAGGGAGACCCAGCTCAGCATTTGGTCGAAGAAGTGTTATTTCGTGCTGCAAAGAAAGCTGGGTTGGTCTTTCACGAGTTGCTCGAAATTCCACAGGGTGATAGGCGCCGTTACCATGATGATGTTTCCATCATTGTTATTTCTTTGGAAGGAAGAATATGGAGATCCTGTGATCGTCGAACAAAACTAGCACCAGCAAAAATGAGCACGCCCTTGTTCCATGAATTCAAAAAGCAAGCTTCTTTCTTCCTAAAGGAGAAAATCAAAACTGCTAGATTAGCTCTGACAGATGTCACCCCTGCAGAACTGATGACAGAAGAGACAACTGGTGGAAATCCATGGGCTCCAGATTCCAGAACTCTCAGATCAATTTCAAAGGCTGCTTTTGAGTTAGATGATTATTGGAGGATTGTGGAGATTCTGCATAGAAGGTTCCTGAAATTCGAAAAGAAGAATTGGAGGATCTCTTACAATTCCCTGATCGTGCTTGAGCACCTGTTGACTCAAGGACCAGAGAGTGTTGCTGAGGAATTTAAGAGTGACAAAAATGTCATCAGCCAGATGAAAAGTTTTCAGTATATTGATGACACTGGGTTTAATTGGGGCCTAACTGTCAGAAAGAAATCGGAGAGAATAGTGAATCTGCTGGAAGAAGTAACTCTTCTAAAGGAAGAGAGAAAACAAGCTAGAAGGTTATCTAGAGGAATTGAAGGTTTTGGAAGTTTTCCCCATCGGTCAACTCCAGCACAAAGTATTCTACGTGAGAAATCAATGCCAACCACACTCGAGAGATATGACTCAGACTTGAACAACCATGAAGATCAGGAAAACAAGTCCTCTTGTTCAAACAATGGTGTGGATGTGGACACAGTAGCTGTGAAATCTCCTGGCCATCAAGGTGGAACTTTCAAGTCCTTGGATGGTGTGGAAGACAAGGGATACCAGGATGATCTAGGCAACAGTCAAATGCTTCAGAAATCTGAAACAGATGCTAAAGAAAACAAGGAGCCTAGCAAGGAAGAGTTCCATCTATGGAACATGAAAGGTGAGTCCAAACCCCTTTTGGATTGTGGTGAAGAGGATTCCAGGATTGGAATCATCAGAACCGAAGATGATCACCCCTTTAATTCAACTGAATTGCATGGCACTGCCTCACTGCTTTCTGCCAGAGACGGAATACTACAAGGGTGTTGA 3060 0.4768 MGNGIGKLTVCFTGHNSGGRRKQDISILITEPLDEGLGHSFCYVRPDPTGISSSKVHSEETTTFRTISGASVSANTSTPLSTAFVDLYSYGCIDRAAAFESSTSFASLPLQPIPRNLVNSGPFSGNLGGGGFPGSGPLERGFMSGPIERGFMSGPIDRGLFSGPMEREGNGSDHFPRSFSHGGMGLGLGLGLRVRTRKGRWIRVLQRAISKTLSRGQNSIVAPIKGVVVKEPEWMVAAAEKHNENLSVNLSSEGSLEDDDSMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYTAVHKELKGLLWDDGSTQENSTPKEEVLRDVTDVADVDACSHCVEHENSNCNKSTSKKGRNSRNRYKGAANKWEENQRRWKCEWDRERLELDRRLKEQLNSSRSGCGGAASSINHADVLEALSRALRKTEESYLDVADKMVMENPELALMGSCVLVMLMKGEDVYVMNVGDSRAVLAQKAEPDYWLGKIRQDLERINEETMNDLESWDVDNSNLVPSLSAIQLTKDHSTSVEEEIQRIKKEHPDDPCAVVNDRVKGSLKVTRAFGAGFLKQHHRLGPKDKFLILCSDGLYQYLSNEEAVAEVEHFITLQPEGDPAQHLVEEVLFRAAKKAGLVFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSCDRRTKLAPAKMSTPLFHEFKKQASFFLKEKIKTARLALTDVTPAELMTEETTGGNPWAPDSRTLRSISKAAFELDDYWRIVEILHRRFLKFEKKNWRISYNSLIVLEHLLTQGPESVAEEFKSDKNVISQMKSFQYIDDTGFNWGLTVRKKSERIVNLLEEVTLLKEERKQARRLSRGIEGFGSFPHRSTPAQSILREKSMPTTLERYDSDLNNHEDQENKSSCSNNGVDVDTVAVKSPGHQGGTFKSLDGVEDKGYQDDLGNSQMLQKSETDAKENKEPSKEEFHLWNMKGESKPLLDCGEEDSRIGIIRTEDDHPFNSTELHGTASLLSARDGILQGC 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01306 1019 CDD ENTH 723 839 - -
Vian5g01306 1019 SUPERFAMILY PP2C-like 273 672 IPR036457 -
Vian5g01306 1019 MobiDBLite consensus disorder prediction 861 880 - -
Vian5g01306 1019 Gene3D - 237 678 IPR036457 -
Vian5g01306 1019 ProSiteProfiles ENTH domain profile. 715 848 IPR013809 -
Vian5g01306 1019 Pfam Protein phosphatase 2C 421 627 IPR001932 -
Vian5g01306 1019 Coils Coil 827 854 - -
Vian5g01306 1019 PANTHER PROTEIN PHOSPHATASE 2C 255 669 IPR015655 GO:0004722|GO:0006470
Vian5g01306 1019 MobiDBLite consensus disorder prediction 916 962 - -
Vian5g01306 1019 SMART enth_2 721 848 IPR013809 -
Vian5g01306 1019 Pfam ENTH domain 721 842 IPR013809 -
Vian5g01306 1019 ProSiteProfiles PPM-type phosphatase domain profile. 259 671 IPR001932 -
Vian5g01306 1019 CDD PP2Cc 423 671 IPR001932 -
Vian5g01306 1019 SMART PP2C_4 260 669 IPR001932 -
Vian5g01306 1019 SUPERFAMILY ENTH/VHS domain 701 848 IPR008942 -
Vian5g01306 1019 Gene3D - 717 864 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01306 Vian-Chr5 35778544 35786656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01306 1 679 PP2C-type Phosphatase Gene Family AT1G07630 64.167 0.0 856
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01306 - - pvu:PHAVU_011G064200g 1218.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01306 5 35778544 35786656 Vian5g01306 5 35778544 35786656 ECH