Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01151 ATGGAGATTCAACAATCGCTGAAGCTCACCATCCACAAGAAATGGCCATCGTCACCAAAGAAAACATCAAAAGATTCAGAACCGATAAACACCACTGCAACTCCCAAGCTCAAATGGAAGAAAATCTTCTTTCACACTAAAACCAAACCCAAAATCCAAACCCCCCCAGATGAGTTCCTCTGCCCCGTTTCCCGTTCCCTCATGTTCGACCCCGTCATCGTCTCCTCCGGCCACTCCTTCGAACGCTCCTCCGTCGAAGCCTGTAAAAATCTCAACTTTACACCACAACTCCCCGACGGCACTACCCCCGATTTCTCCACCCTCATCCCCAACCTCGCCCTTAAATCCGCCATCCTCAAGTGGAAAAAGGTGCAAGTGCTTAAATGGTTGAGTGTTCATTCAGTCTTGGTGAAAGGACAGGCTATCACGTCCATTGAAGAGTGGCAGTGGGGTGAATAG 459 0.4924 MEIQQSLKLTIHKKWPSSPKKTSKDSEPINTTATPKLKWKKIFFHTKTKPKIQTPPDEFLCPVSRSLMFDPVIVSSGHSFERSSVEACKNLNFTPQLPDGTTPDFSTLIPNLALKSAILKWKKVQVLKWLSVHSVLVKGQAITSIEEWQWGE 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01151 152 PANTHER U BOX DOMAIN-CONTAINING 47 123 - -
Vian5g01151 152 MobiDBLite consensus disorder prediction 1 31 - -
Vian5g01151 152 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 36 131 IPR013083 -
Vian5g01151 152 ProSiteProfiles U-box domain profile. 54 128 IPR003613 GO:0004842|GO:0016567
Vian5g01151 152 Pfam U-box domain 56 123 IPR003613 GO:0004842|GO:0016567
Vian5g01151 152 SUPERFAMILY RING/U-box 52 123 - -
Vian5g01151 152 SMART Ubox_2 58 121 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01151 Vian-Chr5 33736267 33739173 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01151 34 121 U-box Gene Family AT3G47820 51.579 3.88e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01151 - - gmx:100775869 211.075