Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01138 ATGGGGGGGTTCAGCGTAAGAACCAGCAGCAGCAGGAAAATGAGGGTTCTGGGATGTATTTTGAAGTTGAAGGGTGTGTTGGAAAAGCTTCAAAAGAGTGTCTTGTTGCGGAGACATAAATCAAGTTTCTGTGAAGGAGATTATGAAGAATTGGGAGATCACAGAGGGTGTGTTGCTGAAGATGTGAAAGAAGGGCATTTTGTTGTGATTGCAAAGGATAATATTGAGACAAAGAGATTGGTGGTTCCGTTGAGCTGTTTAAAGAACGCAAGATTCTTGAGGCTGTTGGAGGAAGCAGCAGAAGAATATGGGTTTGATCAACATGGTGCACTGACCATACCTTGCAGGCCTAGTGAACTTGAGATGCTATTGGCTCAACTATGGAAAGAAAGAAGACGATTCTGA 405 0.4321 MGGFSVRTSSSRKMRVLGCILKLKGVLEKLQKSVLLRRHKSSFCEGDYEELGDHRGCVAEDVKEGHFVVIAKDNIETKRLVVPLSCLKNARFLRLLEEAAEEYGFDQHGALTIPCRPSELEMLLAQLWKERRRF 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01138 134 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 40 123 IPR003676 GO:0009733
Vian5g01138 134 Pfam Auxin responsive protein 56 125 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01138 Vian-Chr5 33471082 33471486 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01138 46 124 Calmodulin-binding Proteins AT5G20810 40.506 5.64e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01138 - K14488 vum:124826917 228.794
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01138 5 33471082 33471486 Vian5g01138 5 33471082 33471486 ECH
Vian11g00509 11 5048440 5048847 Vian5g01138 5 33471082 33471486 PCT