Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01127 ATGATGGTCTATGTTGGTCCAATGAGAATTGAGGGTTTTGAACCTGTTACACAAGTGTTGGAGTTGGGAATTATTGTTCACTCTGTTATTATTAGAATTTCATTGGGAGCTTCAGATAATCCTGACACGATAAGACCACTAGTAGCTGCGTTGACTTTTCATCAATTCTTTGAAGGCATGGGACTTGGAAGCTGTATATCTCAGGCAAACTTCAAGAGAGTATCTGTCACAGTGATGGGATTGTTCTTTGCATTGACTATTCCAATCTGGGTTGGTATTGGCATAGGAATTTCAAGTGTTTATAATGAAAACAGTCCAACTGCTCTTATTGTGGAAGGAGTTTTTAATGCACCTTCAGCAGGGATTTTAATTTACATGGCTCTGGTTGATCTTCTTGCCAATGATTTCATGAGTCCAAGAATGCAACAAAGTAGCATACTCTGTTTTGGAGCCAATGTTTCTCTTTTGCTGGGAGCTGGTTTGATGTCTCTCATCGCTAAATGGACTTAA 510 0.3922 MMVYVGPMRIEGFEPVTQVLELGIIVHSVIIRISLGASDNPDTIRPLVAALTFHQFFEGMGLGSCISQANFKRVSVTVMGLFFALTIPIWVGIGIGISSVYNENSPTALIVEGVFNAPSAGILIYMALVDLLANDFMSPRMQQSSILCFGANVSLLLGAGLMSLIAKWT 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01127 169 PANTHER ZINC/IRON TRANSPORTER 17 163 - -
Vian5g01127 169 Pfam ZIP Zinc transporter 12 166 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vian5g01127 169 NCBIfam ZIP zinc/iron transport family 16 168 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01127 Vian-Chr5 33300100 33302521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01127 16 168 Inorganic Solute Cotransporters AT2G32270 64.052 5.34e-64 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01127 K14709 - gmx:100789557 240.35