Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01099 ATGGAATTGATGTTGGTGCCTCCATCATGGCTGGAACAACTCTTATCCACCACATTCTTCACCATAAGAAGATCTTCGTATCATGATGTTGTGAGGGTAGCAGAGATTCAGAAAGTTTTGGATATCAGTGGAGTTCAGACTTATGTGATCAACAGTGCTAAAGTTATTTTCCTGAATGAGAGGCCTCAGAATCAATCAAAAACCAGTAACATGGTTGGTGGTGGAAAAAGCAATTCTCATTTGTGTGAAATTTGCAGAAGGAATCTCTTGGATCCTTTTCGTTTCTGTTCTTTGGGATGCAAGGTTGAAGGAACAAAGAAGAATGGGAATGTGAGCTTTGTCTTAAGCGCAAAGAAAGACGAAGAAATAGGGAGAATGCATGAAGGAATGCGAAGAAGGTTGCCATCAAAGGAAGAATTGCGTGAAGGAATCCACAAACAAGTGTACCAAAGCACGTCTTCTAATTCACATCTAAGGCCATCCCTACAACATGGTTGTTCAAATTCAAGGAGAAGAAAAGGGATACCTCATAGAGCACCTTTAGGTCCATAA 552 0.4058 MELMLVPPSWLEQLLSTTFFTIRRSSYHDVVRVAEIQKVLDISGVQTYVINSAKVIFLNERPQNQSKTSNMVGGGKSNSHLCEICRRNLLDPFRFCSLGCKVEGTKKNGNVSFVLSAKKDEEIGRMHEGMRRRLPSKEELREGIHKQVYQSTSSNSHLRPSLQHGCSNSRRRKGIPHRAPLGP 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01099 183 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 22 181 - -
Vian5g01099 183 MobiDBLite consensus disorder prediction 148 183 - -
Vian5g01099 183 Pfam PLATZ transcription factor 23 102 IPR006734 -
Vian5g01099 183 MobiDBLite consensus disorder prediction 148 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01099 Vian-Chr5 32990705 32991978 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vian5g01099 PLATZ 6.8e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01099 - - gmx:100787414 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01099 5 32990705 32991978 Vian5g01099 5 32990705 32991978 ECH