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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vian5g01070
ATGTTTGAAATGGCTATGTCACTGTGGAGAAGTCGCACTGCTTCATCAACACTCAACTTGTTAGCCAATACTCTTCGCGGATTCTCTTCTGAGGTGACAAACACTAGCGCTCAAAGAACGCGAGAGAGTATGATGAATCAAATGGTGTATTCTGACATAAACTCACGAATTGGGAGTTGCATGCCACTGTCTGCAATGCGAATTGGAACAATCATTCACAACATTGAGTTGAACCCAGGGCAAGGTGGCAAGCTTGTCCGAGCTGCAGGAACCAGTGCAAAGATCTTGAAAGAGCCCACATCAGCATACTGTTTGATCCAGATGCCCTCTGGTGTTAAAAAGTTAATTGATTCTAGGTGTAGGGCCACCATTGGTGTTGTGTCTAATCCAAGTCATGGAGATCGGAAGCTTAGGAAGGCTGGTCACAGCCGATGGCTTGGTCGACGACCCGTTGTTCGAGGAGTGGCAATGAATCCGGTAGATCATCCTCATGGAGGAGGAGAGGGTAAAAGCAAGAGTAGTGGAAAATGGGGGAAAGGATCTCGCACTCCTTGGGGCAAGCCAACGAAGGGTGGCTATAAGACAGGACCCTTGAAGCGCAGAAGGTAG
609
0.4811
MFEMAMSLWRSRTASSTLNLLANTLRGFSSEVTNTSAQRTRESMMNQMVYSDINSRIGSCMPLSAMRIGTIIHNIELNPGQGGKLVRAAGTSAKILKEPTSAYCLIQMPSGVKKLIDSRCRATIGVVSNPSHGDRKLRKAGHSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGKWGKGSRTPWGKPTKGGYKTGPLKRRR
202
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vian5g01070
202
ProSitePatterns
Ribosomal protein L2 signature.
150
161
IPR022671
GO:0003735|GO:0005840|GO:0006412
Vian5g01070
202
MobiDBLite
consensus disorder prediction
156
202
-
-
Vian5g01070
202
NCBIfam
50S ribosomal protein L2
51
197
IPR005880
GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740
Vian5g01070
202
FunFam
50S ribosomal protein L2
128
202
-
-
Vian5g01070
202
Pfam
Ribosomal Proteins L2, C-terminal domain
57
186
IPR022669
GO:0003735|GO:0005840|GO:0006412
Vian5g01070
202
SMART
Ribosomal_L2_C_2
55
188
IPR022669
GO:0003735|GO:0005840|GO:0006412
Vian5g01070
202
PANTHER
RIBOSOMAL PROTEIN L2
47
201
IPR002171
GO:0003735|GO:0005840|GO:0006412
Vian5g01070
202
Gene3D
Ribosomal protein L2, domain 3
128
202
IPR014726
-
Vian5g01070
202
SUPERFAMILY
Translation proteins SH3-like domain
57
192
IPR008991
-
Vian5g01070
202
FunFam
60S ribosomal protein L2, mitochondrial
51
127
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vian5g01070
Vian-Chr5
32461252
32462383
Dispersed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vian5g01070
54
167
Cytoplasmic Ribosomal Protein Gene Family
AT3G51190
43.333
2.52e-23
92.0
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vian5g01070
-
-
gmx:100792418
321.627
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