Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00990 ATGTGGCTGAAGGAGAGTGGAAGTTCGTTTTTGGTGACGGCAGTAACCATACCTGAGCATTCCCGGTGTCGAGGGCGTTCGTTTGAACCGATCAGTTTTCGATTCCGAGCTGTAATATATACGAAAACACAGTCCTACAATGCAATATATATTTACCAATTAATTAATCAAATAGCTCACTTTTCTTCGTTGAAGCTATTCAAGTTCATGTCTTCCACAAAGAAAAGTCTTCTCAGAACTGTGTTCACAGCAAACGGAAGCTGTGGTTGCAGCAAATCAAAATCCTCCGAAGTTCATGAACCAACCCCAATACCCAAAGCCTCCAACAACACTCACCAAAAACCAAACAACCTCAGCAGCATGGCCTCTTCCACCACTTCAATGGAACACGTAGATGAAGAAGAGTTCACCTCCACCACAGTATCAGAATCCGAGACTTTTCATGATCCCAACAACAACAACGTTGCACTCAAACGAAGCCCTCTTGTCGACAGTGTGGCCATCGAGAAGGACTCTTCCAACCCGTATCATGATTTCAGACACTCCATGCTCCAAATGATCTTTGAGAAAGAGATCGAGTCGGAGGAAGATCTTCAAGATCTTCTGCAGTGCTTTCTTCACCTGAATGCACCGTGTCACCACCACGTCATCGTGAAAGCCTTCGACGCCATCTGCGAAGAAGCTTTTCCTCGCAAGGTTGGTACCACTCCGGCTGCGTCCGAACCTTCCCCCTCTCGCCGGAGCCCTCTTCGAAAGAGCAAGTGA 765 0.468 MWLKESGSSFLVTAVTIPEHSRCRGRSFEPISFRFRAVIYTKTQSYNAIYIYQLINQIAHFSSLKLFKFMSSTKKSLLRTVFTANGSCGCSKSKSSEVHEPTPIPKASNNTHQKPNNLSSMASSTTSMEHVDEEEFTSTTVSESETFHDPNNNNVALKRSPLVDSVAIEKDSSNPYHDFRHSMLQMIFEKEIESEEDLQDLLQCFLHLNAPCHHHVIVKAFDAICEEAFPRKVGTTPAASEPSPSRRSPLRKSK 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00990 254 MobiDBLite consensus disorder prediction 88 127 - -
Vian5g00990 254 MobiDBLite consensus disorder prediction 88 158 - -
Vian5g00990 254 NCBIfam uncharacterized plant-specific domain TIGR01568 166 225 IPR006458 -
Vian5g00990 254 MobiDBLite consensus disorder prediction 233 254 - -
Vian5g00990 254 MobiDBLite consensus disorder prediction 140 158 - -
Vian5g00990 254 Pfam Transcriptional repressor, ovate 172 227 IPR006458 -
Vian5g00990 254 ProSiteProfiles OVATE domain profile. 168 227 IPR006458 -
Vian5g00990 254 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 78 228 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00990 Vian-Chr5 31363791 31375904 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vian5g00990 Ovate 4.8e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00990 - - gmx:102660065 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00615 11 6263683 6264177 Vian5g00990 5 31363791 31375904 PCT