LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vian5g00982	ATGGCAGGGTTGATAAGCAAGATAAACCGTTCTTCCATTGGCCCTTTGCCTCCATGTTATTCCCCTTCCTTGAAAACACTGATAAAGGGCATGCTAAGAAAAAATCCTGAACATCGACCAACAGCATCTGAGGTGTTAAAGCACCCTTATTTACAGCCTTATGTGGATCAATACCGTCCAGCTTTCAGTCCTCCATCAACCTGTTCTCCTGAAAAATCAATTTCTACTGTCAACTATCCTCGGAAAAATATGGCTGAAAGTCAAAACAGTAATAGTTCCAACAGTGACAAAGATAGTTTGATGTCAAATGAGAAAAGCATTGCAACAGCAGTACCAAAGTGTGAGAACAAAGCCACTGAGATGGATCAAACATCACTCGATGATGATGGTTCAGAGGAAGAAAGTGGCTCTAGAAATGCCAATGGCAATACCAAAACAGCTGAGCAAGAGGCGATGAAACCATCTCATAATGCACACCATTCTCCCGTTGAATCTAAGCAGCCAAAAACAATTAGAAATATAATGATGGCATTGAAAGAAGGAAAGGTTAGAGAAGCAACTTCTCCAATGAGAGGCAATCGTGTAAAGCCTGGTGGTGTATCAACTCAGAAAATAAGTACTGAGACATTGTCTAAATTGCCTAAGCCTATTTTTATTGCTCCTATTGTGAAACCTATGGTAGAGTCACCAACTGTTGCACTTGCACGGGCAACCCCTGACTCTGCAAAAAGAATGCAGGGGTCACATCAATCAAAGCAACAGTTTCTGATGGTAGAAGCCTCACCAAAACTTAAAGCTAGACATGATTTGACTCCACCACCTGCAGTTGTCAAACAAGTAGATGGAGATGTTCCTCCCAGGCCAAGACAAAGGACTCCCCCAAGCTTACTTAGAAGACCTTCATTTTCTGGAAGGATGAGGCTGGTTGGAATTGATGTTTCAAATGCAGCAAATGATACTGGAAAGCTAGGCACAGATAAAATAGTTCAGGAACATGAGATGAGCCCTTCTCAGTTGGCTGACGACAATGTACCACCAAGTATTTCGAGACAGGTTACTAGAGAGCCCCTGAAGGTTTTTGAAAGAAGTTCAAGAGGAATGCAAACAGATAGCAGCAATTCTGCTTCGTCTTCGGTTTCTATCCGAGGTGAACTTGCCGATGATGCCACAACTTTTATTGACATGAAAGAACAGATGCTTCCTGGACATTCGAATGTAAGCCACATTGGAGGTGTGGAATCATGTCCTGACAGCAGCCCTCTGACTACTTGTGCACATTGTAAGGTGGTTGAAAATGTTCCTGAAGATTCATGTGAGATTGCCATGAATTTTCAAAATACTATAAGCAGTAATGAGAAAGTGAGTTCCAGTTTAAGTCAAGATCACCATGTTGAAGATTCTAAGGTAGCACTGGCTTCAGAAAGGGGTCTTCTTAAATCCCAGCCAACTATGTCTACTACTACTTCTGGCTGTGATGATGGATCTGTTGATCCCTCTGCTGGAGCCACCAATGAAATCAAAGATTTTCAAGATATTACCAAGGAAATGCCTTTGGCCAAGTCTACGAAACACGCATCCCCAAGTTCTGGAGAAAAGTCTGTTCACACAGAAGTTAGTCCAGAAAGTGAACCCGAACTCCTTATTCAGCCAGCACTTGGATGTAAGTCCCCTGGTGATGACAAATTCACAGTGAGAGAGAGACTGTCACCTGTCGTTGAAACTGTTCCTCTGGTTACCCCTACTAAATTATCAAGCCAGAAAGTTTTGCAAGAGAAAGGAACTGTGCTGCAGAGTCCAGCACCAGAAAGGCCTGATACTGGCCATCTTCCTCCAGCTTTTGATGATGTTATCCATGTCATACGTCATAGTAGTTACCGCGTTGGCAGTGATCAGCCAGTGAAGGAATCTGTGGAGATGGGAGTTCAAAATGTAGATGTTGGTAAGTTTATCAATGTTGTGAGGGATGATTTAGAAATGAGGAACATAACGTCACCTTTGACTCTCAAATCTTCAAGTTGCTCTGATGTTACAAGCTTGAAATCTGACCAGTTGGAAATGAAAAACTTAAACACTCCTCCTATCCTTAAATCTTCAAGTTTCTCAGAATCAAGCAATTCTGATCATCCTGGTCTTAAGGAGCAAGATGTGAGTAACCCTCCTCCACTAGTTTCAGAACCTGAATCTACTGAGCTCAGTAAAAGTAACACTCCTGGGAATGAAGAGAAACCACCAGCAAAGGAAACATTGGATGTGAAATCTTTCAGACAGAGAGCAGAGGCACTTGAAGAGCTCTTGGAGTTGTCTGCAGAGTTGCTGCAGCAAAACAGATTGGAGGAACTTCAAGTTGTTCTGAAGCCTTTTGGGAAAGATAAGGTCTCCCCAAGGGAGACAGCCATATGGTTAGCCAAGAGTCTCAAAGGAATGATGTCTGAGGAAAGTGGGGGACGCTCTTCATAA	2457	0.4269	MAGLISKINRSSIGPLPPCYSPSLKTLIKGMLRKNPEHRPTASEVLKHPYLQPYVDQYRPAFSPPSTCSPEKSISTVNYPRKNMAESQNSNSSNSDKDSLMSNEKSIATAVPKCENKATEMDQTSLDDDGSEEESGSRNANGNTKTAEQEAMKPSHNAHHSPVESKQPKTIRNIMMALKEGKVREATSPMRGNRVKPGGVSTQKISTETLSKLPKPIFIAPIVKPMVESPTVALARATPDSAKRMQGSHQSKQQFLMVEASPKLKARHDLTPPPAVVKQVDGDVPPRPRQRTPPSLLRRPSFSGRMRLVGIDVSNAANDTGKLGTDKIVQEHEMSPSQLADDNVPPSISRQVTREPLKVFERSSRGMQTDSSNSASSSVSIRGELADDATTFIDMKEQMLPGHSNVSHIGGVESCPDSSPLTTCAHCKVVENVPEDSCEIAMNFQNTISSNEKVSSSLSQDHHVEDSKVALASERGLLKSQPTMSTTTSGCDDGSVDPSAGATNEIKDFQDITKEMPLAKSTKHASPSSGEKSVHTEVSPESEPELLIQPALGCKSPGDDKFTVRERLSPVVETVPLVTPTKLSSQKVLQEKGTVLQSPAPERPDTGHLPPAFDDVIHVIRHSSYRVGSDQPVKESVEMGVQNVDVGKFINVVRDDLEMRNITSPLTLKSSSCSDVTSLKSDQLEMKNLNTPPILKSSSFSESSNSDHPGLKEQDVSNPPPLVSEPESTELSKSNTPGNEEKPPAKETLDVKSFRQRAEALEELLELSAELLQQNRLEELQVVLKPFGKDKVSPRETAIWLAKSLKGMMSEESGGRSS	818

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vian5g00982	818	MobiDBLite	consensus disorder prediction	364	381	-	-
	Vian5g00982	818	MobiDBLite	consensus disorder prediction	690	712	-	-
	Vian5g00982	818	MobiDBLite	consensus disorder prediction	361	381	-	-
	Vian5g00982	818	MobiDBLite	consensus disorder prediction	481	503	-	-
	Vian5g00982	818	Coils	Coil	755	781	-	-
	Vian5g00982	818	MobiDBLite	consensus disorder prediction	136	151	-	-
	Vian5g00982	818	MobiDBLite	consensus disorder prediction	62	106	-	-
	Vian5g00982	818	MobiDBLite	consensus disorder prediction	690	751	-	-
	Vian5g00982	818	Gene3D	Transferase(Phosphotransferase) domain 1	2	131	-	-
	Vian5g00982	818	ProSiteProfiles	Protein kinase domain profile.	1	51	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vian5g00982	818	MobiDBLite	consensus disorder prediction	152	166	-	-
	Vian5g00982	818	MobiDBLite	consensus disorder prediction	721	741	-	-
	Vian5g00982	818	MobiDBLite	consensus disorder prediction	267	300	-	-
	Vian5g00982	818	PANTHER	SERINE/THREONINE-PROTEIN KINASE NEK	1	377	-	-
	Vian5g00982	818	MobiDBLite	consensus disorder prediction	62	169	-	-
	Vian5g00982	818	MobiDBLite	consensus disorder prediction	519	554	-	-
	Vian5g00982	818	SUPERFAMILY	Protein kinase-like (PK-like)	9	95	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vian5g00982	Vian-Chr5	31285989	31294223	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vian5g00982	K08857		-	gmx:100818747	1209.13

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vian11g00618	11	6284505	6291510	Vian5g00982	5	31285989	31294223	PCT