Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00977 ATGGGGTTTTTGCTCAAAGAGGTTTTGAGGACTCTGTGCTCAAGGAATCGCTGGTCTTATGCCGTGTTTTGGAAGATCGGTTGCAACAATTCCAAGCTGTTAATCTGGGAAGATCACTACTATGAACCCTTGCCATCTCCTTTCCCTCCACGTACTGTTGGGATGTCTAATTTTCCATACCGAGACGGGGAAGGGTGCTGGTTTTCTTCTGAGTCTCAACTGGGGATTCAGGAGGAGGACAGAGTCGGTGGATTGATTAACAAAATGATGTTGAATAATTCAGTCAGTATTGCTGGAGAAGGGATGGTTGGACGGACAACATTTACAGGAAACTATCAGTGGATTCTTATGAACAATTTCAGTAGAGATGCATATCCACCAGAGGTATATTCTGAGTTGCATTACCAATTTTCTGCTGGAATGCAGACAGTAGCAGTTATTCCTGTGCTTCCTCATGGGGTTGTTCAATTTGGTTCTTTATTTCCAATAATGGAAGATGTTGGATTTGTGAATGATGTGAAGAACTTGATCTTGCAATTGGGATGTGTACCTGGTGCCCTTCTTTCTGAAGATTATTCAGCAAAAGTTTCGAGTGAAAGACTTGGTGTACCTGTCACTGCTGATACACCAGTCATTACTTCCAAATGCACTCCCTCTGCAGCTAATGGCTCCAACCAACTAACTAATTCTACTATTGCTTCAAGGTCTGTGACTCCATCACCTCATCCACCAAGGGGAGAAATAGATAATTACCAGGGTTCTGCATTGACTCCTCAAACCTATGACCAAAACCAAATATTTGATAGCATTTGCCAACCAAAGTCTCATTCAATGGTAAAAACAATGGCCTATAGCCAGCAGAAGAAGACGGTCTTCCATACTGAAGCTAAAGTGATACCGACAAATTTTGATTCATGTATGCAACAGCCTTCTGCTTATAATTCCAGATCTGCATTCAATGAATTAGCTGGCTTCAATCAATTAAATCTGAGTTGCAACCTTAACTATATGGAACAACAAACATCAGGTGTTGGGAGACAGAGTCACGTTAATCCCAACATGAATCCATCAAGTGCCTCAAACATGCCTCAACTGAAAACAGGTGTAGGCAAAATTCTTGAACAGAATCAGAGTTCTGGTGGCGGTTCACTATTTGGAGGAATCCCAATATGTGGTGGGAGTAATCTTTTGAGGACAAATATGATTAACTGCTCTGTTTCAAATTCTCCCAAAGTACCCACTTCTGAATTTTCTGGAAGTCACAAGATTGAGTTTGGGCTTCAAAATAACAATTCAACAACTGATACTGGGGTCTGTTCTGTGCCTAATTTCTGTAACCAATCAGTTACCAGTCACATGAATCTAGAAAACTCTGCTCAGAAGAACCTTCCCATTGATTTAAAGCATGCTTGTGATGCTTTCGTTTCAACTGATCAAAGGATACATGATGATTTGCTTCATACCGCTCTTAATATTCCGTCTCTTCATCTTGAGGAGAATGAGCCTATGGGTGATAATATCCCTGGTTTTGTTCAAGATTGCCTCAATAAAGATTTTACTAGTGTGGTGAAAATGAATGTTAAGCATGAAGAGACCTATAATCAACTTCCATCAGGGGATGATCTCTTCGATGTTTTAGGCGTGGATTTGAAAAGGAAACTACTCAATGGAAACTGGGATAATTTGCTTGCCAGTGATTCAGAGGCCAACAGAGAGCGTCTAGATAAAAAGGCAACATGCATGAATTTGCCTGGTGTACGTCCTGATAACAGCTATTCAGTTAAGGAAGCAATATCAGACAGTGGGATCTTCTCAGGAACGGGCACTGACCACCTCTTAGATGCTGTTGTTTCAAAAGCTCAATCTGCTCCAAAACAGAGTTCTGATGAAATGTCTTGCAGGACAACATTGACAAGGGTTAGTACTGCCTCCGTTTCCTCTCCTGCCTGCAACCAGGTTCTGTCTGATCATGTCCTGAAGGGATTGTTTGATTTTCCCAAGAACGGGGCTAAAAGAGCTGCTGGGGAAACCAGTTCTCTTAGGTCTGGGTGCAGCAAGGATGATGCTGGAAACTGCTCTCAAATGACTTCCATATATGGTTCTAAGCTTAGTTCATGGGTTGAGAATGGTAGTAGTGTGAAACGTGAAAGCAGCGTTTCAACTGGATACTCTAAGAGACCAGAAGAAGTTTGCAAATCAAATAGGAAAAGGCTTAAACCTGGAGAGAATCCTAGACCTCGCCCTAAAGATCGCCAAATGATTCAAGATCGTGTTAAAGAATTAAGGGAAATTGTGCCAAACGGAGCAAAATGTAGCATAGATGCACTTCTGGAAAAGACAATCAAGCATATGCTTTTCCTGCAAAGTGTAACAAAGCATGCTGACAAGCTGAAACAGACAGGGGAATCTAAGATTGTTAGTAAAGAAGGTGGGTTGCTATTAAAAGACAACTTTGAAGGAGGGGCTACATGGGCATATGAGGTTGGCTCGCAATCAATGGTTTGTCCAATCATTGTTGAGGATCTTAATCCACCTCGTCAGATGCTAGTAGAGATGCTTTGTGAGGAACGGGGTTTCTTTCTGGAAATAGCTGACTTAATCAGAGGATTAGGATTAACTATCTTGAAGGGAGTTATGGAAGCTCGTAATGACAAGATCTGGGCACGCTTTGCAGTTGAGGCCAACAGGGACGTGACGAGGATGGAAATATTTATGTCACTGGTTCGTCTTTTGGATCAAACAGTGAAGGGTGGTGCATCTTCATCGAATGCAACTGATAATAACAACGTGATGATGTATCATCATTCTTTCCCACAAGCTACCCAGATAGCAGCAACTGGTAGACCTAGTAGTTTGCAATGA 2862 0.4182 MGFLLKEVLRTLCSRNRWSYAVFWKIGCNNSKLLIWEDHYYEPLPSPFPPRTVGMSNFPYRDGEGCWFSSESQLGIQEEDRVGGLINKMMLNNSVSIAGEGMVGRTTFTGNYQWILMNNFSRDAYPPEVYSELHYQFSAGMQTVAVIPVLPHGVVQFGSLFPIMEDVGFVNDVKNLILQLGCVPGALLSEDYSAKVSSERLGVPVTADTPVITSKCTPSAANGSNQLTNSTIASRSVTPSPHPPRGEIDNYQGSALTPQTYDQNQIFDSICQPKSHSMVKTMAYSQQKKTVFHTEAKVIPTNFDSCMQQPSAYNSRSAFNELAGFNQLNLSCNLNYMEQQTSGVGRQSHVNPNMNPSSASNMPQLKTGVGKILEQNQSSGGGSLFGGIPICGGSNLLRTNMINCSVSNSPKVPTSEFSGSHKIEFGLQNNNSTTDTGVCSVPNFCNQSVTSHMNLENSAQKNLPIDLKHACDAFVSTDQRIHDDLLHTALNIPSLHLEENEPMGDNIPGFVQDCLNKDFTSVVKMNVKHEETYNQLPSGDDLFDVLGVDLKRKLLNGNWDNLLASDSEANRERLDKKATCMNLPGVRPDNSYSVKEAISDSGIFSGTGTDHLLDAVVSKAQSAPKQSSDEMSCRTTLTRVSTASVSSPACNQVLSDHVLKGLFDFPKNGAKRAAGETSSLRSGCSKDDAGNCSQMTSIYGSKLSSWVENGSSVKRESSVSTGYSKRPEEVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLEKTIKHMLFLQSVTKHADKLKQTGESKIVSKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAVEANRDVTRMEIFMSLVRLLDQTVKGGASSSNATDNNNVMMYHHSFPQATQIAATGRPSSLQ 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00977 953 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 738 787 IPR011598 GO:0046983
Vian5g00977 953 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 176 IPR025610 -
Vian5g00977 953 MobiDBLite consensus disorder prediction 217 255 - -
Vian5g00977 953 MobiDBLite consensus disorder prediction 728 752 - -
Vian5g00977 953 CDD bHLH_AtLHW_like 742 811 - -
Vian5g00977 953 MobiDBLite consensus disorder prediction 217 238 - -
Vian5g00977 953 MobiDBLite consensus disorder prediction 710 724 - -
Vian5g00977 953 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 947 IPR043561 GO:0003700|GO:0006355
Vian5g00977 953 MobiDBLite consensus disorder prediction 710 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00977 Vian-Chr5 31192075 31197439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00977 515 932 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 50.346 2.45e-119 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g00977 - - gmx:100786351 1547.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00625 11 6380344 6385165 Vian5g00977 5 31192075 31197439 PCT